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MicroRNA gene polymorphisms and environmental factors increase patient susceptibility to hepatocellular carcinoma
Yin-Hung Chu1, Ming-Ju Hsieh2, Hui-Ling Chiou3
1Institute of Medicine, Chung Shan Medical University, Taichung, Taiwan.
Background:
Micro RNAs (miRNAs) are small RNA fragments that naturally exist in the human body. Through various physiological mechanisms, miRNAs can generate different functions for regulating RNA protein levels and balancing abnormalities. Abnormal miRNA expression has been reported to be highly related to several diseases and cancers. Single-nucleotide polymorphisms (SNPs) in miRNAs have been reported to increase patient susceptibility and affect patient prognosis and survival. We adopted a case-control research design to verify the relationship between miRNAs and hepatocellular carcinoma.
Methodology/Principal Findings:
A total of 525 subjects, including 377 controls and 188 hepatocellular carcinoma patients, were selected. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and real-time PCR were used to analyze miRNA146a (rs2910164), miRNA149 (rs2292832), miRNA196 (rs11614913), and miRNA499 (rs3746444) genetic polymorphisms between the control group and the case group. The results indicate that people who carry the rs3746444 CT or CC genotypes may have a significantly increased susceptibility to hepatocellular carcinoma (adjusted odds ratio [AOR] = 2.84, 95% confidence interval [CI] = 1.88-4.30). In addition, when combined with environmental risk factors, such as smoking and alcohol consumption, interaction effects were observed between gene polymorphisms and environmental factors (odds ratio [OR] = 4.69, 95% CI = 2.52-8.70; AOR = 3.38, 95% CI = 1.68-6.80).
Conclusions:
These results suggest that a significant association exists between miRNA499 SNPs and hepatocellular carcinoma. Gene-environment interactions of miRNA499 polymorphisms, smoking, and alcohol consumption might alter hepatocellular carcinoma susceptibility.
Insights
Single-nucleotide polymorphisms (SNPs) in microRNAs (miRNAs) are linked to hepatocellular carcinoma. Specifically, miRNA499 (rs3746444) gene variations increase cancer susceptibility, especially when combined with smoking and alcohol consumption.
Area of Science:
- Genetics
- Molecular Biology
- Oncology
Background:
- Micro RNAs (miRNAs) are small RNA fragments regulating gene expression.
- Abnormal miRNA expression is associated with various diseases, including cancers.
- Single-nucleotide polymorphisms (SNPs) in miRNAs can influence disease susceptibility and prognosis.
Purpose of the Study:
- To investigate the association between specific miRNA genetic polymorphisms and hepatocellular carcinoma (HCC) risk.
- To explore potential gene-environment interactions in HCC development.
Main Methods:
- A case-control study design was employed with 377 controls and 188 HCC patients.
- Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and real-time PCR were used to genotype miRNA SNPs.
- miRNA146a (rs2910164), miRNA149 (rs2292832), miRNA196 (rs11614913), and miRNA499 (rs3746444) were analyzed.
Main Results:
- The miRNA499 (rs3746444) CT or CC genotypes were significantly associated with increased HCC susceptibility (AOR=2.84, 95% CI=1.88-4.30).
- Significant gene-environment interactions were observed between miRNA499 polymorphisms and environmental factors like smoking and alcohol consumption (OR=4.69, 95% CI=2.52-8.70; AOR=3.38, 95% CI=1.68-6.80).
Conclusions:
- A significant association exists between miRNA499 single-nucleotide polymorphisms and hepatocellular carcinoma risk.
- Interactions between miRNA499 gene polymorphisms and environmental factors (smoking, alcohol) may modulate HCC susceptibility.
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