Molecular epidemiology of sil locus in clinical Streptococcus pyogenes strains

Céline Plainvert1, Márcia Dinis2, Miriam Ravins3

  • 1Assistance Publique Hôpitaux de Paris, Service de Bactériologie, Centre National de Référence des Streptocoques, Groupe Hospitalier Paris Centre Cochin-Hôtel Dieu-Broca, Paris, France INSERM, U1016, Institut Cochin, Paris, France CNRS (UMR 8104), Paris, France Université Paris Descartes, Sorbonne Paris Cité, Paris, France.

Insights

The sil locus in Group A Streptococcus (GAS) is not linked to invasive disease. Most GAS strains lack a functional sil system, despite its presence in some emm genotypes.

Area of Science:

  • Microbiology
  • Bacterial Pathogenesis
  • Genetics

Background:

  • Streptococcus pyogenes (group A Streptococcus [GAS]) causes diverse infections, with regulatory mutations potentially driving invasiveness.
  • The sil locus, a quorum-sensing system, has been hypothesized to influence GAS invasiveness.
  • Previous studies suggested low sil prevalence and a link to genetic background, but invasiveness correlation was unassessed.

Purpose of the Study:

  • To investigate the prevalence of the sil locus in a large, diverse collection of GAS strains.
  • To determine the proportion of GAS strains with a functional sil system.
  • To assess the correlation between the sil locus and GAS invasiveness.

Main Methods:

  • Analysis of 637 nonredundant GAS strains from France with known clinical history and emm genotypes.
  • Detection of sil locus presence and prediction of functional sil system based on gene integrity.
  • Statistical assessment of the relationship between sil status and clinical presentation (invasive, noninvasive, carriage).

Main Results:

  • The sil locus was present in 206 out of 637 (32%) GAS strains, with prevalence varying significantly by emm genotype.
  • A functional sil system was predicted in only 9% of GAS strains due to inactivating mutations.
  • No correlation was found between the presence or absence of a functional sil locus and the invasiveness of the GAS strain.

Conclusions:

  • The sil locus prevalence in GAS is higher than previously reported but varies by emm genotype.
  • A functional sil system is rare in GAS strains, often due to inactivating mutations.
  • The sil locus, functional or not, does not appear to be a determinant of GAS invasiveness.

Related Concept Videos

Modern Molecular Taxonomy01:29

Modern Molecular Taxonomy

Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
836
Clinical Significance of Antibiotic Resistance01:25

Clinical Significance of Antibiotic Resistance

Methicillin-resistant Staphylococcus aureus (MRSA) presents a critical public health threat, arising from its capacity to resist β-lactam antibiotics due to acquisition of the mecA gene within the staphylococcal cassette chromosome mec (SCCmec). This gene encodes penicillin-binding protein 2a (PBP2a), which impairs binding efficacy of methicillin and other β-lactams. MRSA has evolved into distinct clonal lineages impacting humans and animals alike, reinforcing its significance within...
90
Bacterial Phylum Spirochaetes01:30

Bacterial Phylum Spirochaetes

Spirochetes, unique bacteria in the phylum Spirochaetes, are gram-negative, motile, tightly coiled, slender, and flexible. They inhabit aquatic sediments and animals, with some causing diseases like syphilis. Spirochetes are classified into eight genera based on habitat, pathogenicity, phylogeny, and characteristics.Their distinctive motility arises from endoflagella, located within the cell’s periplasm. These endoflagella anchor at the cell poles and extend along the cell length, encased...
1.5K
Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
14.6K