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Constructing Mutants in Serotype 1 Streptococcus pneumoniae strain 519/43
Published on: September 11, 2020
Molecular epidemiology of sil locus in clinical Streptococcus pyogenes strains
Céline Plainvert1, Márcia Dinis2, Miriam Ravins3
1Assistance Publique Hôpitaux de Paris, Service de Bactériologie, Centre National de Référence des Streptocoques, Groupe Hospitalier Paris Centre Cochin-Hôtel Dieu-Broca, Paris, France INSERM, U1016, Institut Cochin, Paris, France CNRS (UMR 8104), Paris, France Université Paris Descartes, Sorbonne Paris Cité, Paris, France.
Abstract:
Streptococcus pyogenes (group A Streptococcus [GAS]) causes a wide variety of diseases, ranging from mild noninvasive to severe invasive infections. Mutations in regulatory components have been implicated in the switch from colonization to invasive phenotypes. The inactivation of the sil locus, composed of six genes encoding a quorum-sensing complex, gives rise to a highly invasive strain. However, studies conducted on limited collections of GAS strains suggested that sil prevalence is around 15%; furthermore, whereas a correlation between the presence of sil and the genetic background was suggested, no link between the presence of a functional sil locus and the invasive status was assessed. We established a collection of 637 nonredundant strains covering all emm genotypes present in France and of known clinical history; 68%, 22%, and 10% were from invasive infections, noninvasive infections, and asymptomatic carriage, respectively. Among the 637 strains, 206 were sil positive. The prevalence of the sil locus varied according to the emm genotype, being present in >85% of the emm4, emm18, emm32, emm60, emm87, and emm90 strains and absent from all emm1, emm28, and emm89 strains. A random selection based on 2009 French epidemiological data indicated that 16% of GAS strains are sil positive. Moreover, due to mutations leading to truncated proteins, only 9% of GAS strains harbor a predicted functional sil system. No correlation was observed between the presence or absence of a functional sil locus and the strain invasiveness status.
Insights
The sil locus in Group A Streptococcus (GAS) is not linked to invasive disease. Most GAS strains lack a functional sil system, despite its presence in some emm genotypes.
Area of Science:
- Microbiology
- Bacterial Pathogenesis
- Genetics
Background:
- Streptococcus pyogenes (group A Streptococcus [GAS]) causes diverse infections, with regulatory mutations potentially driving invasiveness.
- The sil locus, a quorum-sensing system, has been hypothesized to influence GAS invasiveness.
- Previous studies suggested low sil prevalence and a link to genetic background, but invasiveness correlation was unassessed.
Purpose of the Study:
- To investigate the prevalence of the sil locus in a large, diverse collection of GAS strains.
- To determine the proportion of GAS strains with a functional sil system.
- To assess the correlation between the sil locus and GAS invasiveness.
Main Methods:
- Analysis of 637 nonredundant GAS strains from France with known clinical history and emm genotypes.
- Detection of sil locus presence and prediction of functional sil system based on gene integrity.
- Statistical assessment of the relationship between sil status and clinical presentation (invasive, noninvasive, carriage).
Main Results:
- The sil locus was present in 206 out of 637 (32%) GAS strains, with prevalence varying significantly by emm genotype.
- A functional sil system was predicted in only 9% of GAS strains due to inactivating mutations.
- No correlation was found between the presence or absence of a functional sil locus and the invasiveness of the GAS strain.
Conclusions:
- The sil locus prevalence in GAS is higher than previously reported but varies by emm genotype.
- A functional sil system is rare in GAS strains, often due to inactivating mutations.
- The sil locus, functional or not, does not appear to be a determinant of GAS invasiveness.
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