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Published on: July 22, 2012
Detection and genetic characterization of cosavirus in a pediatric patient with diarrhea
Pattara Khamrin1, Niwat Maneekarn
1Department of Microbiology, Faculty of Medicine, Chiang Mai University, 110 Intawarorose, Sriphoom, Muang, Chiang Mai, 50200, Thailand.
Insights
Human cosavirus (HCoSV) was detected in a child with diarrhea in Thailand, marking the first pediatric case in the region. This finding suggests a shared evolutionary origin for HCoSV strains in Thailand and China.
Area of Science:
- Virology
- Molecular Biology
- Public Health
Background:
- Human cosavirus (HCoSV), a member of the Picornaviridae family, is a recently identified virus.
- Acute gastroenteritis remains a significant health concern in pediatric populations worldwide.
Observation:
- A study screened 411 fecal samples from children with acute gastroenteritis in Thailand.
- Human cosavirus (HCoSV) was identified in one pediatric patient using RT-nested PCR.
Findings:
- This case represents the first documented HCoSV infection in a child with diarrhea in Thailand.
- Phylogenetic analysis indicated the Thai HCoSV strain belongs to genotype A6, closely related to Chinese strains.
- The genetic similarity suggests a common evolutionary ancestor for HCoSV strains in Thailand and China.
Implications:
- The findings highlight the presence of HCoSV in Thailand and its potential role in pediatric gastroenteritis.
- Further research is crucial to determine the prevalence, genetic diversity, and clinical significance of HCoSV.
- Understanding HCoSV epidemiology is essential for public health strategies and disease prevention.
Abstract:
Human cosavirus (HCoSV) is a newly discovered virus of the family Picornaviridae. A total of 411 fecal specimens were collected from children admitted to hospitals with acute gastroenteritis symptoms in Chiang Mai, Thailand, in 2010-2011 and screened for HCoSV by an RT-nested PCR method. HCoSV was found in a single specimen (CMH-N199-11) collected from a 3-year-old boy. This represents the first report of HCoSV infection in a pediatric patient with diarrhea in Thailand. Analysis of the complete coding sequence revealed that this HCoSV was most similar to the Chinese HCoSV-A reference strain SH1, and belonged to genotype A6. The data imply that HCoSVs detected in Thailand and China share the same evolutionary ancestor. Our results emphasize the need for further research to understand the distribution, genetic diversity, and association of the HCoSV with acute gastroenteritis in humans.
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