The association between the LPA gene polymorphism and coronary artery disease in Chinese Han population
Zi-Kai Song1, Hai-Di Wu1, Hong-Yan Cao1
1Department of Cardiology, The First Hospital of Jilin University, 3302 JiLin Street, Changchun 130031, China.
Insights
Genetic variations in the LPA gene, specifically rs9364559, are linked to coronary artery disease (CAD) risk in the Chinese Han population. Certain LPA gene haplotypes containing rs9364559 also increase CAD susceptibility.
Area of Science:
- Genetics
- Cardiovascular Disease Research
- Population Studies
Background:
- Lipoprotein(a) [Lp(a)] is a recognized independent risk factor for coronary artery disease (CAD).
- The LPA gene encodes apolipoprotein(a), a key component of Lp(a), and its variations have been implicated in CAD risk.
Purpose of the Study:
- To investigate the association between polymorphisms in the LPA gene and the risk of CAD.
- To analyze specific single nucleotide polymorphisms (SNPs) and haplotypes within the LPA gene in a Chinese Han population.
Main Methods:
- Genotyping of five LPA gene SNPs (rs1367211, rs3127596, rs6415085, rs9347438, and rs9364559) using Sequenom MassARRAY.
- Case-control study design involving 560 CAD patients and 531 non-CAD controls of Chinese Han ancestry.
- Haplotype analysis to assess combined SNP effects on CAD risk.
Main Results:
- The rs9364559 polymorphism in the LPA gene showed a significant association with CAD risk at both allele (P = 0.046) and genotype (P = 0.026) levels.
- The minor allele (G) of rs9364559 was found at a higher frequency in the CAD patient group compared to the control group.
- Haplotype analysis revealed that four specific haplotypes incorporating rs9364559-G were associated with an elevated risk of developing CAD.
Conclusions:
- The rs9364559 polymorphism within the LPA gene may play a role in the pathogenesis of coronary artery disease.
- Individuals carrying specific haplotypes of the LPA gene, particularly those including rs9364559-G, may face a higher risk of CAD in this population.
Abstract:
Lp(a) has been well known as an independent risk factor for coronary artery disease (CAD). The LPA gene, as it encodes apo(a) of the Lp(a) lipoprotein particle, was associated with increased risk of CAD. The purpose of this study was to analyze the relationship between the polymorphisms of LPA gene and CAD in Chinese Han population. Five SNPs (rs1367211, rs3127596, rs6415085, rs9347438, and rs9364559) in the LPA gene were genotyped using Sequenom MassARRAY time-of-flight mass spectrometer (TOF) in 560 CAD patients as case group and 531 non-CAD subjects as control group. The numbers of these two groups were from Chinese Han ancestry. The results showed that allele (P = 0.046) and genotype (P = 0.026) of rs9364559 in the LPA gene was associated with CAD. The frequency of rs9364559 minor allele (G) in case group was obviously higher than that in control group. Results of haplotype analysis showed that 4 haplotypes which contained rs9364559-G were associated with increased risk of CAD in this population. This study explored rs9364559 in the LPA gene may be associated with the pathogenesis of CAD; and the risk of CAD might be higher in the population carrying 4 haplotypes of different blocks in the LPA gene.
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