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Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
Multi-marker Solid Tumor Panels Using Next-generation Sequencing to Direct Molecularly Targeted Therapies.
Michael Marrone1, Kelly K Filipski1, Elizabeth M Gillanders1
1Epidemiology and Genomics Research Program, Division of Cancer Control and Population Sciences, National Cancer Institute, NIH, Rockville, Maryland, USA.
Next-generation sequencing tumor panels offer a molecular blueprint for cancer treatment. However, limited data exists on their clinical validity and impact on patient outcomes for targeted therapies.
Area of Science:
- Oncology
- Genomics
- Molecular Biology
Background:
- Contemporary oncology increasingly focuses on evaluating multiple genomic alterations in tumor-driving pathways.
- Commercially available tumor panels utilizing next-generation sequencing (NGS) aim to create comprehensive molecular tumor blueprints.
- The goal is to match actionable variants with targeted therapies, irrespective of tumor origin.
Purpose of the Study:
- To review the current state of post-analytic processes for NGS tumor panels.
- To assess the existing evidence for the clinical validity of these panels in solid tumors.
- To highlight the need for new evidentiary standards for NGS-based oncology diagnostics.
Main Methods:
- Review of current literature on next-generation sequencing tumor panels.
- Analysis of data regarding post-analytic processes and clinical validity.
- Examination of existing research on treatment response and patient outcomes.
Main Results:
- Limited information is available on the post-analytic procedures specific to NGS platforms used in commercial tumor testing.
- Evidence demonstrating the clinical validity of genetic markers in these panels, linking them to treatment response for targeted therapies, is scarce across solid tumor types.
- No published data currently supports improved patient outcomes when using these commercial NGS tests for treatment guidance.
Conclusions:
- Next-generation sequencing tumor panels present unique challenges regarding analytical and clinical validity.
- Establishing robust evidentiary standards is crucial for evaluating the clinical utility of these tests in oncology.
- Further research is needed to validate NGS-based diagnostics and demonstrate their impact on clinical decision-making and patient outcomes.
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