Coordinated regulation of transcription and alternative splicing by the thyroid hormone receptor and its associating

Tetsurou Satoh1, Akiko Katano-Toki1, Takuya Tomaru1

  • 1Department of Medicine and Molecular Science, Gunma University Graduate School of Medicine, Maebashi, Japan.

Insights

Thyroid hormone receptor (TR) and its coregulators modulate gene expression by coupling transcription and pre-mRNA splicing. This study shows liganded TR influences alternative splicing of CD44 pre-mRNA coordinated with transcription.

Area of Science:

  • Molecular Biology
  • Gene Regulation
  • RNA Splicing

Background:

  • Transcription and pre-mRNA processing are coupled to regulate gene expression.
  • Steroid hormone receptors influence alternative splicing linked to transcription.
  • The role of thyroid hormone receptor (TR) in transcription-coupled splicing is unknown.

Purpose of the Study:

  • To investigate if TR modulates pre-mRNA processing coupled to triiodothyronine (T3)-induced gene transcription.
  • To examine the role of TR coregulators in this coupled process.

Main Methods:

  • Constructed a luciferase reporter and CD44 alternative splicing minigene with a minimal promoter containing thyroid hormone-response elements.
  • Utilized luciferase reporter and splicing minigene assays in HeLa cells.
  • Examined the effects of TRβ1, T3, TRAP/Mediator complex subunit, and polypyrimidine tract-binding protein-associated splicing factor.

Main Results:

  • T3 increased luciferase activity and CD44 variable exon inclusion in a dose- and time-dependent manner with TRβ1.
  • TRβ1 did not affect CD44 minigene splicing driven by the CMV promoter.
  • TRAP/Mediator subunit enhanced T3-induced exon inclusion, while polypyrimidine tract-binding protein-associated splicing factor decreased it.

Conclusions:

  • Liganded TR, with its cofactors, modulates alternative pre-mRNA splicing coupled to gene transcription.
  • TRAP/Mediator complex subunit acts as a splicing factor in this process.
  • Polypyrimidine tract-binding protein-associated splicing factor functions as a TR corepressor influencing splicing.

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