Expression of a codon-optimized Aspergillus niger pectin methylesterase gene in the methylotrophic yeast Candida

Kosuke Kawaguchi1, Hiroya Yurimoto, Yasuyoshi Sakai

  • 1a Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwake , Sakyo-ku, Kyoto , Japan.

Insights

This study expresses Aspergillus niger pectin methylesterase (PME) in yeast, enhancing pectin utilization. However, PME overproduction hinders yeast growth on plant leaves, indicating specific metabolic trade-offs.

Area of Science:

  • Biotechnology
  • Molecular Biology
  • Microbial Engineering

Background:

  • Pectin methylesterase (PME) is crucial for pectin degradation.
  • Methylotrophic yeasts like Candida boidinii are valuable hosts for heterologous protein expression.
  • Understanding PME function in yeast is key for biotechnological applications.

Purpose of the Study:

  • To express a codon-optimized Aspergillus niger pectin methylesterase (PME) gene in Candida boidinii.
  • To evaluate the impact of PME expression on yeast growth and pectin utilization.
  • To assess the effect of PME overproduction on yeast proliferation in a plant-associated environment.

Main Methods:

  • Gene synthesis and codon optimization for Aspergillus niger PME.
  • Heterologous expression of the PME gene in the methylotrophic yeast Candida boidinii.
  • Growth assays on pectin-rich media and Arabidopsis thaliana leaves.

Main Results:

  • PME-producing C. boidinii strains exhibited enhanced growth on pectin compared to wild-type strains.
  • The enhanced growth suggests efficient utilization of methyl ester groups in pectin by the engineered yeast.
  • Conversely, PME overproduction detrimentally affected C. boidinii proliferation on Arabidopsis thaliana leaves.

Conclusions:

  • Codon-optimized PME expression in C. boidinii facilitates pectin degradation and utilization.
  • PME overproduction presents a metabolic burden impacting yeast fitness in a plant-leaf environment.
  • This study highlights the complex metabolic interactions and potential trade-offs of expressing plant-degrading enzymes in microbial hosts.