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Updated: Apr 26, 2026

Microfluidic Mixers for Studying Protein Folding
Published on: April 10, 2012
Relationship between chain collapse and secondary structure formation in a partially folded protein
Kanako Nakagawa1, Yoshiteru Yamada, Yoshitaka Matsumura
1Department of Bioinformatics, Soka University, 1-236 Tangi-cho, Hachioji, Tokyo, 192-8577, Japan.
Abstract:
Chain collapse and secondary structure formation are frequently observed during the early stages of protein folding. Is the chain collapse brought about by interactions between secondary structure units or is it due to polymer behavior in a poor solvent (coil-globule transition)? To answer this question, we measured small-angle X-ray scattering for a series of β-lactoglobulin mutants under conditions in which they assume a partially folded state analogous to the folding intermediates. Mutants that were designed to disrupt the secondary structure units showed the gyration radii similar to that of the wild type protein, indicating that chain collapse is due to coil-globule transitions.
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