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Updated: Apr 24, 2026

Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
Published on: April 11, 2016
New strategies in personalized medicine for solid tumors: molecular markers and clinical trial designs
Juliane M Jürgensmeier1, Joseph P Eder1, Roy S Herbst2
1Yale Cancer Center, Yale School of Medicine, New Haven, Connecticut.
Abstract:
The delineation of signaling pathways to understand tumor biology combined with the rapid development of technologies that allow broad molecular profiling and data analysis has led to a new era of personalized medicine in oncology. Many academic institutions now routinely profile patients and discuss their cases in meetings of personalized medicine tumor boards before making treatment recommendations. Clinical trials initiated by pharmaceutical companies often require specific markers for enrollment or at least explore multiple options for future markers. In addition to the still small number of targeted agents that are approved for the therapy of patients with histological and molecularly defined tumors, a broad range of novel targeted agents in development are undergoing clinical studies with companion profiling to determine the best-responding patient population. Although the present focus of profiling lies in genetic analyses, additional tests of RNA, protein, and immune parameters are being developed and incorporated in clinical research, and these methods are likely to contribute significantly to future patient selection and treatment approaches. As the advances in tumor biology and human genetics have identified promising tumor targets, the ongoing clinical evaluation of novel agents will now need to show if the promise can be translated into benefit for patients.
Insights
Personalized medicine in oncology leverages tumor molecular profiling to tailor treatments. Ongoing research aims to translate advances in tumor biology and genetics into patient benefit through novel targeted agents.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Advances in tumor biology and molecular profiling technologies have ushered in a new era of personalized medicine in oncology.
- Academic institutions increasingly utilize molecular profiling for patient case discussions and treatment recommendations.
- Pharmaceutical clinical trials often require specific molecular markers for patient enrollment.
Purpose of the Study:
- To highlight the paradigm shift towards personalized medicine in oncology driven by molecular profiling.
- To discuss the integration of various profiling methods (genetic, RNA, protein, immune) in clinical research.
- To emphasize the ongoing evaluation of novel targeted agents and their potential patient benefit.
Main Methods:
- Broad molecular profiling of tumors.
- Analysis of genetic, RNA, protein, and immune parameters.
- Clinical evaluation of novel targeted agents with companion profiling.
Main Results:
- Personalized medicine tumor boards are routine in academic institutions.
- Numerous novel targeted agents are in clinical development with companion profiling.
- Genetic analyses are the current focus, with RNA, protein, and immune profiling emerging.
Conclusions:
- Molecular profiling is central to personalized oncology treatment strategies.
- Future patient selection and treatment approaches will likely incorporate diverse molecular and immune parameters.
- Translating tumor biology insights and novel agent development into tangible patient benefit remains a key objective.
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