Related Experiment Video
Updated: Apr 24, 2026

An Aquatic Microbial Metaproteomics Workflow: From Cells to Tryptic Peptides Suitable for Tandem Mass Spectrometry-based Analysis
Published on: September 15, 2015
Meeting report: Ocean 'omics science, technology and cyberinfrastructure: current challenges and future requirements
Jack A Gilbert1, Gregory J Dick2, Bethany Jenkins3
1Argonne National Laboratory, Argonne, IL, USA & Department of Ecology and Evolution, University of Chicago, Chicago, IL.
Abstract:
The National Science Foundation's EarthCube End User Workshop was held at USC Wrigley Marine Science Center on Catalina Island, California in August 2013. The workshop was designed to explore and characterize the needs and tools available to the community that is focusing on microbial and physical oceanography research with a particular emphasis on 'omic research. The assembled researchers outlined the existing concerns regarding the vast data resources that are being generated, and how we will deal with these resources as their volume and diversity increases. Particular attention was focused on the tools for handling and analyzing the existing data, on the need for the construction and curation of diverse federated databases, as well as development of shared, interoperable, "big-data capable" analytical tools. The key outputs from this workshop include (i) critical scientific challenges and cyber infrastructure constraints, (ii) the current and future ocean 'omics science grand challenges and questions, and (iii) data management, analytical and associated and cyber-infrastructure capabilities required to meet critical current and future scientific challenges. The main thrust of the meeting and the outcome of this report is a definition of the 'omics tools, technologies and infrastructures that facilitate continued advance in ocean science biology, marine biogeochemistry, and biological oceanography.
Related Concept Videos
Deep Sea Microbial Ecology
Marine Microbial Ecology
Genomics
Freshwater Microbial Ecology
Synthetic Biology
Golden rice
Golden rice is a genetically modified...
Bioreactor Design and Operational System

