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Gas-phase helical peptides mimic solution-phase behavior.

Lindsay J Morrison1, Vicki H Wysocki

  • 1Ohio State University , 484 West 12th Avenue, Columbus, Ohio 43210, United States.

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|September 10, 2014
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Gas-phase peptide studies reveal alpha-helix stabilization at termini. Helical and globular conformations of doubly charged peptides were analyzed, showing sequence and length influence stability.

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Area of Science:

  • Biophysical Chemistry
  • Mass Spectrometry
  • Protein Conformation

Background:

  • Alpha-helices in solution are stabilized by terminal capping interactions.
  • Gas-phase studies offer insights into intrinsic stabilizing properties.
  • Previous solution-phase studies examined N-terminal amino acid effects.

Purpose of the Study:

  • To investigate helical and globular conformations of gas-phase peptides.
  • To explore the influence of peptide sequence and length on helical stability.
  • To analyze the conformational preferences of peptide fragments.

Main Methods:

  • Analysis of gas-phase, doubly charged peptides (XAnK).
  • Mass spectrometry to study peptide conformations and fragmentation.
  • Varying collision energies to induce conformational changes.

Main Results:

  • Helical and globular conformations observed in gas-phase peptides.
  • Helical conformation abundance depends on peptide length and N-terminal residue (X).
  • Helical b-ion fragments preferentially form at lower collision energies, especially from helical precursors.

Conclusions:

  • Gas-phase peptide studies confirm solution-phase observations on helical stabilization.
  • Fragment stability is influenced by length, N-terminal residue, precursor conformation, and collision energy.
  • A minimum fragment length (b10) is required for stable helical conformations in b-ions.