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MicroRNA 29 targets nuclear factor-κB-repressing factor and Claudin 1 to increase intestinal permeability
QiQi Zhou1, Stefan Costinean2, Carlo M Croce2
1Department of Medicine, University of Texas Medical Branch, Galveston, Texas; Department of Veteran Affairs, Cincinnati VA Medical Center, Cincinnati, Ohio.
Background & Aims:
Some patients with irritable bowel syndrome with diarrhea (IBS-D) have intestinal hyperpermeability, which contributes to their diarrhea and abdominal pain. MicroRNA 29 (MIR29) regulates intestinal permeability in patients with IBS-D. We investigated and searched for targets of MIR29 and investigated the effects of disrupting Mir29 in mice.
Methods:
We investigated expression MIR29A and B in intestinal biopsies collected during endoscopy from patients with IBS (n = 183) and without IBS (controls) (n = 36). Levels were correlated with disease phenotype. We also generated and studied Mir29(-/-) mice, in which expression of Mir29a and b, but not c, is lost. Colitis was induced by administration of 2,4,6-trinitrobenzenesulfonic acid; intestinal tissues were collected and permeability was assessed. Microarray analysis was performed using tissues from Mir29(-/-) mice. Changes in levels of target genes were measured in human colonic epithelial cells and small intestinal epithelial cells after knockdown of MIR29 with anti-MIRs.
Results:
Intestinal tissues from patients with IBS-D (but not IBS with constipation or controls) had increased levels of MIR29A and B, but reduced levels of Claudin-1 (CLDN1) and nuclear factor-κB-repressing factor (NKRF). Induction of colitis and water avoidance stress increased levels of Mir29a and Mir29b and intestinal permeability in wild-type mice; these increased intestinal permeability in colons of far fewer Mir29(-/-) mice. In microarray and knockdown experiments, MIR29A and B were found to reduce levels of NKRF and CLDN1 messenger RNA, and alter levels of other messenger RNAs that regulate intestinal permeability.
Conclusions:
Based on experiments in knockout mice and analyses of intestinal tissue samples from patients with IBS-D, MIR29 targets and reduces expression of CLDN1 and NKRF to increase intestinal permeability. Strategies to block MIR29 might be developed to restore intestinal permeability in patients with IBS-D.
Insights
MicroRNA 29 (MIR29) increases intestinal permeability in irritable bowel syndrome with diarrhea (IBS-D) by reducing Claudin-1 and NKRF. Blocking MIR29 may restore gut barrier function in IBS-D patients.
Area of Science:
- Gastroenterology
- Molecular Biology
- Genetics
Background:
- Irritable bowel syndrome with diarrhea (IBS-D) is associated with intestinal hyperpermeability.
- MicroRNA 29 (MIR29) plays a role in regulating intestinal permeability in IBS-D patients.
Purpose of the Study:
- To investigate the targets of MIR29.
- To examine the effects of Mir29 disruption on intestinal permeability in a mouse model.
Main Methods:
- Expression analysis of MIR29A/B in intestinal biopsies from IBS patients and controls.
- Generation and study of Mir29 knockout mice, including induction of colitis and assessment of intestinal permeability.
- Microarray analysis and knockdown experiments in human intestinal cell lines.
Main Results:
- Patients with IBS-D showed increased MIR29A/B and decreased Claudin-1 (CLDN1) and nuclear factor-κB-repressing factor (NKRF) levels.
- Mir29 knockout mice exhibited reduced intestinal permeability following colitis induction compared to wild-type mice.
- MIR29A/B were found to reduce NKRF and CLDN1 mRNA levels, impacting intestinal permeability.
Conclusions:
- MIR29 targets CLDN1 and NKRF, increasing intestinal permeability in IBS-D.
- Therapeutic strategies aimed at blocking MIR29 could potentially restore intestinal barrier function in IBS-D.
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