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Updated: Apr 22, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
BMP-mediated induction of GATA4/5/6 blocks somitic responsiveness to SHH
Georges Daoud1, Hervé Kempf1, Deepak Kumar1
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Bldg C-Room 303, 240 Longwood Ave, Boston, MA 02115, USA.
Abstract:
The relative timing of SHH and BMP signals controls whether presomitic mesoderm (PSM) cells will adopt either a chondrogenic or lateral plate mesoderm fate. Here we document that SHH-mediated induction of Nkx3.2 maintains the competence of somitic cells to initiate chondrogenesis in response to subsequent BMP signals by repressing BMP-dependent induction of GATA genes. Conversely, administration of BMP signals to PSM or forced expression of GATA family members in chick PSM explants blocks induction of hedgehog-dependent gene expression. We demonstrate that GATA factors can interact with Gli factors and can recruit the transcriptional co-factor FOG1 (ZFPM1) to the regulatory region of the mouse Gli1 gene, repressing the induction of Gli1 by SHH by binding to both GATA and Gli binding sites. Knockdown of FOG1 reverses the ability of GATA factors to repress Gli1 expression. Our findings uncover a novel role for GATA transcription factors as repressors of hedgehog signaling, and document that NKX3.2 maintains the ability of sclerotomal cells to express SHH transcriptional targets in the presence of BMP signals by repressing the induction of Gata4/5/6.
Insights
Sonic hedgehog (SHH) and bone morphogenetic protein (BMP) signaling pathways interact to control cell fate. Nkx3.2 maintains chondrogenesis by repressing GATA genes, while GATA factors inhibit SHH signaling.
Area of Science:
- Developmental Biology
- Molecular Biology
- Cell Signaling
Background:
- The differentiation of presomitic mesoderm (PSM) into specific cell types is regulated by the interplay of Sonic hedgehog (SHH) and bone morphogenetic protein (BMP) signaling pathways.
- Understanding the molecular mechanisms governing cell fate decisions in early embryonic development is crucial for regenerative medicine and developmental studies.
Purpose of the Study:
- To elucidate the regulatory roles of Nkx3.2 and GATA transcription factors in the context of SHH and BMP signaling during mesoderm differentiation.
- To investigate the interaction between GATA factors, Gli factors, and the co-factor FOG1 in modulating hedgehog signaling.
Main Methods:
- Chick PSM explant cultures
- Gene expression analysis
- Protein-protein interaction studies
- Gene knockdown experiments
Main Results:
- SHH-induced Nkx3.2 maintains chondrogenic competence by repressing BMP-dependent GATA gene induction.
- BMP signaling or GATA factor expression inhibits hedgehog-dependent gene expression in PSM.
- GATA factors, with FOG1, repress SHH-induced Gli1 expression by binding to regulatory regions.
- FOG1 knockdown abrogates GATA-mediated repression of Gli1.
Conclusions:
- GATA transcription factors act as novel repressors of hedgehog signaling.
- Nkx3.2 plays a key role in maintaining sclerotomal cell potential by suppressing GATA induction under BMP influence.
- This study reveals a complex regulatory network governing mesoderm fate decisions through cross-talk between SHH, BMP, Nkx3.2, and GATA pathways.
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