Related Experiment Video
Updated: Apr 21, 2026

Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy
Published on: August 25, 2019
[Comparative study of prenatal diagnosis with single nucleotide polymorphism array and karyotype analysis]
Ling Chang1, Nan Zhao1, Yuan Wei1
1Department of Obstetrics and Gynecology, Peking University Third Hospital, Key Laboratory of Assisted Reproduction, Ministry of Education,Beijing Key Laboratory of Reproductive Endocrinology and Assisted Reproduction,Beijing 100191, China.
Single nucleotide polymorphism (SNP) array analysis and karyotype analysis show significant differences in prenatal diagnosis for high-risk pregnancies. Combining both methods is effective for detecting genetic diseases.
Area of Science:
- Genetics
- Prenatal Diagnosis
- Medical Technology
Background:
- High-risk pregnancies require accurate diagnostic methods.
- Karyotype analysis is a traditional method for detecting chromosomal abnormalities.
- Single nucleotide polymorphism (SNP) array analysis offers higher resolution for genetic variations.
Purpose of the Study:
- To compare the diagnostic roles of SNP array and karyotype analysis.
- To evaluate the combined effectiveness of both methods in prenatal diagnosis for high-risk pregnancies.
Main Methods:
- A study involving 141 high-risk pregnant women was conducted.
- Both SNP array detection and karyotype analysis were performed on samples from umbilical cord and amniotic fluid punctures.
- Data were collected between July 2012 and December 2013.
Main Results:
- The karyotype analysis detected abnormalities in 6.4% of cases.
- The SNP array analysis identified abnormalities in 11.3% of cases.
- The combined approach revealed abnormalities in 12.1% of cases, with significant differences noted between SNP array and karyotype analysis (P=0.039).
Conclusions:
- SNP array analysis and karyotype analysis exhibit distinct roles in prenatal genetic testing.
- Integrating SNP array with karyotype analysis enhances the detection of genetic diseases in prenatal diagnosis.
Related Concept Videos
Karyotyping
Karyotyping
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...

