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Sparsity Inducing Prior Distributions for Correlation Matrices of Longitudinal Data.

J T Gaskins1, M J Daniels2, B H Marcus3

  • 1Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY 40202.

Journal of Computational and Graphical Statistics : a Joint Publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America
|November 11, 2014
PubMed
Summary
This summary is machine-generated.

We introduce novel prior distributions for modeling correlation matrices in longitudinal data using partial autocorrelations (PACs). These priors enable sparse, interpretable representations and efficient computation for time-ordered responses.

Keywords:
Bayesian methodsCorrelation matrixLongitudinal dataMultivariate probitPartial autocorrelationSelection priorsShrinkage

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Area of Science:

  • Statistics
  • Statistical Modeling
  • Longitudinal Data Analysis

Background:

  • Modeling correlation matrices in longitudinal data presents challenges due to positive definite and unit diagonal constraints.
  • The quadratic increase in parameters with dimension necessitates sparse parameterizations for efficiency.

Purpose of the Study:

  • To introduce novel prior distributions for correlation matrices in longitudinal data.
  • To develop priors based on partial autocorrelations (PACs) that allow for sparse and interpretable representations.
  • To offer a computationally attractive alternative to existing methods for correlation matrix selection.

Main Methods:

  • Introduction of two prior distributions on correlation matrices via partial autocorrelations (PACs).
  • The first prior employs shrinkage towards zero for PACs, increasing with lag.
  • The second prior is a selection prior, a mixture of a point mass at zero and a continuous component for each PAC.

Main Results:

  • The proposed priors yield interpretable structures where zero PACs indicate conditional independence.
  • Selection priors on PACs offer a computationally efficient approach compared to direct selection on correlation matrix elements or their inverses.
  • The priors facilitate data-dependent shrinkage and selection in an unconstrained parameter space.

Conclusions:

  • The novel priors provide a flexible and interpretable framework for modeling correlation matrices in longitudinal data.
  • These methods are computationally advantageous and suitable for time-ordered response variables.
  • The effectiveness is demonstrated through simulation studies and a real-world data example.