Trim65: a cofactor for regulation of the microRNA pathway

Shitao Li1, Lingyan Wang, Bishi Fu

  • 1a Department of Microbiology & Immunobiology; Harvard Medical School; Boston , MA USA.

RNA Biology
|December 9, 2014
PubMed

Insights

Researchers discovered TRIM65, a novel regulator of the microRNA (miRNA) pathway. TRIM65 targets TNRC6 proteins for degradation, negatively impacting miRNA-mediated gene silencing.

Area of Science:

  • Molecular Biology
  • Genetics
  • Biochemistry

Background:

  • MicroRNAs (miRNAs) are crucial regulators of gene expression in plants and animals.
  • Understanding the miRNA pathway's protein interactions is key to deciphering gene regulation.
  • Previous studies have identified numerous proteins involved in miRNA biogenesis and function.

Purpose of the Study:

  • To systematically map the protein interactome of the human miRNA pathway.
  • To identify novel regulators of miRNA biogenesis and function.
  • To elucidate the molecular mechanism by which TRIM65 affects miRNA activity.

Main Methods:

  • Proteomic analysis to generate a protein interactome map.
  • Functional analyses to identify novel miRNA pathway regulators.
  • Biochemical studies, including co-localization and complex formation assays.
  • Gain-of-function and RNA interference (RNAi) experiments.

Main Results:

  • A comprehensive protein interactome map of the human miRNA pathway was generated.
  • TRIM65 and three other proteins were identified as novel regulators.
  • TRIM65 forms stable complexes with TNRC6 proteins and co-localizes in P-body-like structures.
  • TRIM65 negatively regulates miRNA-driven mRNA translation suppression by promoting TNRC6 ubiquitination and degradation.

Conclusions:

  • TRIM65 is a novel negative regulator of the miRNA pathway.
  • TRIM65 functions by targeting TNRC6 proteins for degradation, thereby affecting mRNA translation.
  • The findings provide new insights into the regulation of miRNA-mediated gene silencing.

Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
4.4K
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
25.1K
MicroRNAs01:22

MicroRNAs

12.1K
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
1.6K
Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
8.1K
Master Transcription Regulators02:23

Master Transcription Regulators

2.9K