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Published on: June 12, 2018
Trim65: a cofactor for regulation of the microRNA pathway
Shitao Li1, Lingyan Wang, Bishi Fu
1a Department of Microbiology & Immunobiology; Harvard Medical School; Boston , MA USA.
Abstract:
MicroRNA (miRNA) comprise a large family of non-protein coding transcripts which regulate gene expression in diverse biological pathways of both plants and animals. We recently used a systematic proteomic approach to generate a protein interactome map of the human miRNA pathway involved in miRNA biogenesis and processing. The interactome expands the number of candidate proteins in the miRNA pathway and connects the network to other cellular processes. Functional analyses identified TRIM65 and at least 3 other proteins as novel regulators of the miRNA pathway. Biochemical studies established that TRIM65 forms stable complexes with TNRC6 proteins and these molecules co-localize in P-body-like structures. Gain of function and RNAi analyses reveal that TRIM65 negatively regulates miRNA-driven suppression of mRNA translation by targeting TNRC6 proteins for ubiquitination and degradation. The potential molecular mechanisms which regulate TRIM65 catalytic activity are discussed.
Insights
Researchers discovered TRIM65, a novel regulator of the microRNA (miRNA) pathway. TRIM65 targets TNRC6 proteins for degradation, negatively impacting miRNA-mediated gene silencing.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- MicroRNAs (miRNAs) are crucial regulators of gene expression in plants and animals.
- Understanding the miRNA pathway's protein interactions is key to deciphering gene regulation.
- Previous studies have identified numerous proteins involved in miRNA biogenesis and function.
Purpose of the Study:
- To systematically map the protein interactome of the human miRNA pathway.
- To identify novel regulators of miRNA biogenesis and function.
- To elucidate the molecular mechanism by which TRIM65 affects miRNA activity.
Main Methods:
- Proteomic analysis to generate a protein interactome map.
- Functional analyses to identify novel miRNA pathway regulators.
- Biochemical studies, including co-localization and complex formation assays.
- Gain-of-function and RNA interference (RNAi) experiments.
Main Results:
- A comprehensive protein interactome map of the human miRNA pathway was generated.
- TRIM65 and three other proteins were identified as novel regulators.
- TRIM65 forms stable complexes with TNRC6 proteins and co-localizes in P-body-like structures.
- TRIM65 negatively regulates miRNA-driven mRNA translation suppression by promoting TNRC6 ubiquitination and degradation.
Conclusions:
- TRIM65 is a novel negative regulator of the miRNA pathway.
- TRIM65 functions by targeting TNRC6 proteins for degradation, thereby affecting mRNA translation.
- The findings provide new insights into the regulation of miRNA-mediated gene silencing.
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