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Updated: Apr 19, 2026

Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis
Published on: June 27, 2020
Translating genomic discoveries to the clinic in pediatric oncology
Julia Glade Bender1, Anupam Verma, Joshua D Schiffman
1aDivision of Pediatric Hematology/Oncology and Stem Cell Transplantation, Department of Pediatrics, Columbia University Medical Center, New York City, New York bDivision of Pediatric Hematology/Oncology, Department of Pediatrics, University of Utah, Salt Lake City, Utah, USA.
Purpose Of Review:
The present study describes the recent advances in the identification of targetable genomic alterations in pediatric cancers, along with the progress and associated challenges in translating these findings into therapeutic benefit.
Recent Findings:
Each field within pediatric cancer has rapidly and comprehensively begun to define genomic targets in tumors that potentially can improve the clinical outcome of patients, including hematologic malignancies (leukemia and lymphoma), solid malignancies (neuroblastoma, rhabdomyosarcoma, Ewing sarcoma, and osteosarcoma), and brain tumors (gliomas, ependymomas, and medulloblastomas). Although each tumor has specific and sometimes overlapping genomic targets, the translation to the clinic of new targeted trials and precision medicine protocols is still in its infancy. The first clinical tumor profiling studies in pediatric oncology have demonstrated feasibility and patient enthusiasm for the personalized medicine paradigm, but have yet to demonstrate clinical utility. Complexities influencing implementation include rapidly evolving sequencing technologies, tumor heterogeneity, and lack of access to targeted therapies. The return of incidental findings from the germline also remains a challenge, with evolving policy statements and accepted standards.
Summary:
The translation of genomic discoveries to the clinic in pediatric oncology continues to move forward at a brisk pace. Early adoption of genomics for tumor classification, risk stratification, and initial trials of targeted therapeutic agents has led to powerful results. As our experience grows in the integration of genomic and clinical medicine, the outcome for children with cancer should continue to improve.
Insights
Genomic alterations in pediatric cancers are being identified, offering potential therapeutic targets. Translating these discoveries into clinical practice for children with cancer is advancing, though challenges remain.
Area of Science:
- Pediatric Oncology
- Genomics
- Translational Medicine
Background:
- Pediatric cancers encompass a range of hematologic and solid malignancies, each with unique genomic profiles.
- Identifying targetable genomic alterations is crucial for improving patient outcomes.
- The field is rapidly evolving with new sequencing technologies and a growing understanding of tumor biology.
Purpose of the Study:
- To review recent advances in identifying targetable genomic alterations in pediatric cancers.
- To discuss the progress and challenges in translating these genomic findings into clinical therapies.
- To highlight the potential of precision medicine in treating childhood cancers.
Main Methods:
- Comprehensive review of current literature on genomic alterations in pediatric cancers.
- Analysis of progress in clinical trials and precision medicine protocols.
- Examination of challenges in implementing genomic-driven therapies.
Main Results:
- Genomic targets are being defined across various pediatric tumor types, including leukemias, lymphomas, neuroblastomas, sarcomas, and brain tumors.
- Early clinical tumor profiling studies show feasibility and patient interest but limited clinical utility to date.
- Challenges include tumor heterogeneity, evolving sequencing technologies, limited access to targeted therapies, and managing incidental germline findings.
Conclusions:
- Genomic discoveries are rapidly translating into clinical applications in pediatric oncology.
- Genomics is enhancing tumor classification, risk stratification, and targeted therapy trials.
- Continued integration of genomic and clinical medicine promises improved outcomes for children with cancer.
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