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Updated: Apr 19, 2026

Three-Dimensional Shape Modeling and Analysis of Brain Structures
Published on: November 14, 2019
Mixed-Effects Shape Models for Estimating Longitudinal Changes in Anatomy
Manasi Datar1, Prasanna Muralidharan2, Abhishek Kumar3
1Scientific Computing and Imaging Institute, University of Utah.
This study introduces a novel method for analyzing shape changes over time using linear mixed-effects models and correspondence optimization. It enables robust statistical comparison of shape trends between populations.
Area of Science:
- Biomedical Engineering
- Medical Imaging Analysis
- Statistical Shape Analysis
Background:
- Longitudinal shape analysis is crucial for understanding biological processes like growth and disease progression.
- Existing methods often struggle with simultaneously modeling shape variation and establishing accurate correspondences over time.
- Hierarchical modeling offers a powerful framework for capturing population-level and individual-specific changes.
Purpose of the Study:
- To develop a new statistical method for longitudinal shape analysis that integrates correspondence optimization with linear mixed-effects modeling.
- To provide robust statistical significance testing for estimated shape trends.
- To enable comparative analysis of shape trends between different populations.
Main Methods:
- A linear mixed-effects model is fitted to anatomical shape data, incorporating fixed effects for global trends and random effects for individual variations.
- Correspondence optimization is performed simultaneously with model fitting to ensure accurate shape comparisons across time points.
- Permutation tests, including one based on the Hotelling T-squared statistic, are developed for statistical significance evaluation and population comparison.
Main Results:
- The proposed method effectively models hierarchical shape changes in longitudinal data.
- Statistical significance of shape trends can be reliably assessed using the developed permutation tests.
- The Hotelling T-squared based permutation test allows for effective comparison of average shape trends between two populations.
Conclusions:
- The new method provides a robust and statistically sound approach for longitudinal shape analysis.
- It enhances the understanding of shape dynamics in developmental studies and other biomedical applications.
- The simultaneous optimization of correspondences and statistical modeling offers significant advantages over existing techniques.
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