Related Experiment Video
Updated: Apr 19, 2026

Probing the Structure and Dynamics of Interfacial Water with Scanning Tunneling Microscopy and Spectroscopy
Published on: May 27, 2018
Protonated water dimer on benzene: standing Eigen or crouching Zundel?
1The Fritz Haber Research Center, Institute of Chemistry, The Hebrew University of Jerusalem , Jerusalem 91904, Israel.
Abstract:
Protonated water clusters that are hydrogen-bonded to a neutral benzene molecule are a reductionist model for protons at hydrophobic surfaces, which are of fundamental importance in biological energy transduction processes. Of particular interest is the protonated water dimer ("Zundel ion") on benzene, whose gas-phase messenger IR spectrum has been previously interpreted in terms of an asymmetric binding of the protonated water dimer to the benzene ring through a single water molecule. This "standing Eigen" isomer has a hydronium core. We have found an alternative "crouching Zundel" isomer, which attaches to the benzene ring symmetrically via both of its water molecules. When Ar-tagged, it has an IR spectrum in much better agreement with experiment than the standing Eigen isomer, particularly at the lower frequencies. These conclusions are based on static harmonic (and anharmonic) normal-mode analysis using density functional theory with various (dispersion corrected) functionals and particularly on dynamic anharmonic spectra obtained from the dipole autocorrelation functions from classical ab initio molecular dynamics with the BLYP, PBE, and B3LYP functionals. Possible implications to protons on water/organic-phase interfaces are discussed.
More Related Videos
Related Concept Videos
Structure of Benzene: Molecular Orbital Model
Structure of Benzene: Kekulé Model
He proposed that benzene has a cyclic structure of six carbon atoms attached to one hydrogen atom each, with three alternating pi bonds.
NMR Spectroscopy of Benzene Derivatives
Resonance
Hybridization of Atomic Orbitals I
Newman Projections
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as...

