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Updated: Apr 19, 2026

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
Probiotics or antibiotics: future challenges in medicine
Yousef Nami1, Babak Haghshenas1, Norhafizah Abdullah2
1Institute of Biosciences, University Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia.
Antibiotics reduce gut microbiome diversity and increase resistance, while probiotics offer preventive benefits. Understanding these opposing effects is crucial for managing intestinal health and disease.
Area of Science:
- Microbiology
- Genetics
- Environmental Science
Background:
- The intestinal microbiome and its metabolome are influenced by genetic and environmental factors.
- Antibiotic consumption significantly alters the gut microbiome composition and metagenome.
- Probiotics are recognized for preventive medicine, contrasting with antibiotics' therapeutic role.
Purpose of the Study:
- To review the challenges and contrasting effects of antibiotics and probiotics on the intestinal microbiome.
- To explore antibiotic resistance, microbiome diversity reduction, and associated diseases.
- To examine probiotics as 'living drugs,' their epigenetic effects, and the gut microbiome's link to hygiene.
Main Methods:
- Literature review of studies on antibiotics and probiotics.
- Analysis of the impact of antibiotics on microbiome diversity and metagenome.
- Investigation of probiotic mechanisms, including epigenetic alterations.
Main Results:
- Antibiotics are linked to reduced microbiome diversity and increased antibiotic resistance.
- Probiotics may offer benefits through epigenetic modulation and by influencing the gut microbiome.
- Individual gut microbiome specificity highlights susceptibility to environmental changes and diseases.
Conclusions:
- Antibiotics and probiotics present opposing influences on the intestinal microbiome.
- Further research is needed to fully understand the interplay between these treatments and individual gut health.
- Managing the gut microbiome requires considering both detrimental (antibiotics) and beneficial (probiotics) factors.
Related Concept Videos
Probiotics
Microorganisms in Medicine and Therapeutics
Introduction to the Human Microbiota
Antibiotic Selection
Clinical Significance of Antibiotic Resistance
Development of Antibiotic Resistance

