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The Cytoscape app article collection.

Alexander R Pico1, Gary D Bader2, Barry Demchak3

  • 1Gladstone Institutes, San Francisco, CA 95158, USA.

F1000Research
|January 13, 2015
PubMed
Summary

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This summary is machine-generated.

Cytoscape apps extend network visualization and analysis capabilities. This resource collection offers implementation tips for developers and helps researchers discover relevant Cytoscape apps.

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Network Science

Background:

  • Cytoscape is a widely used platform for network visualization and analysis.
  • Its functionality is significantly extended through a diverse ecosystem of third-party applications (apps).
  • Existing resources like the Cytoscape App Store and developer cookbook support app development and distribution.

Purpose of the Study:

  • To introduce a new collection of articles aimed at supporting Cytoscape app development.
  • To assist researchers in identifying and utilizing relevant Cytoscape apps for their work.
  • To provide practical implementation tips for Cytoscape app developers.

Main Methods:

  • This article collection serves as a curated resource.
  • Content includes insights into Cytoscape app features and developer implementation strategies.

Related Experiment Videos

  • The collection is designed to be dynamic and will expand with new app publications.

    • Main Results:

    • Researchers can discover domain-specific Cytoscape apps.
    • App developers gain access to valuable implementation guidance.
    • The collection enhances the Cytoscape ecosystem by fostering app development.

    Conclusions:

    • This article collection is a valuable addition to existing Cytoscape development resources.
    • It aims to facilitate the discovery and utilization of Cytoscape apps.
    • The ongoing expansion of the collection will continue to benefit the Cytoscape community.