Child apolipoprotein E gene variants and risk of cerebral palsy: estimation from case-parent triads
Magne Stoknes1, Espen Lien1, Guro L Andersen2
1Department of Laboratory Medicine, Children's and Women's Health, Faculty of Medicine, Norwegian University of Science and Technology, Trondheim, Norway; Department of Pediatrics, St. Olavs Hospital, Trondheim University Hospital, Norway.
Insights
Cerebral palsy (CP) is linked to the APOE gene, specifically the APOEε3 allele, particularly in preterm infants. This suggests a potential role for APOE in CP development, influencing prenatal outcomes.
Area of Science:
- Genetics
- Neurology
- Pediatrics
Background:
- Cerebral palsy (CP) is a complex neurological disorder with multifactorial causes.
- The apolipoprotein E (APOE) gene is known to play a role in various neurological functions and diseases.
- Genetic factors, including specific gene variants and haplotypes, are increasingly recognized as potential contributors to CP etiology.
Purpose of the Study:
- To investigate the association between cerebral palsy (CP) and genetic variants in the APOE gene.
- To examine the role of the rs59007384 single nucleotide polymorphism (SNP) in the TOMM40 gene in CP.
- To analyze combined haplotypes of APOE and TOMM40 genes in relation to CP risk.
Main Methods:
- Utilized case-parent triad data from 235 children diagnosed with CP, their parents, and a sibling.
- Analyzed DNA extracted from buccal swabs to determine genotypes and haplotypes.
- Estimated relative risks (RR) and 95% confidence intervals (CI) to assess deviations from expected Mendelian inheritance patterns for specific genetic variants and haplotypes.
Main Results:
- Children with CP showed a higher than expected prevalence of the APOEε3 allele (RR 7.5-10.3).
- A combined haplotype of APOEε3 and rs59007384 G was also associated with increased risk in children with CP (RR 2.4-3.7).
- These associations were primarily observed in preterm infants, with no significant deviations found in siblings or for rs59007384 alone.
Conclusions:
- The study suggests a potential association between the APOEε3 allele and an increased risk of cerebral palsy, particularly in preterm births.
- A speculative mechanism proposes that individuals with APOEε2/APOEε4 alleles may have a higher mortality rate following in utero cerebral injury, leading to a relative enrichment of APOEε3 carriers among CP cases.
- Further research is warranted to elucidate the precise role of APOE genetics in the pathogenesis of cerebral palsy.
Objective:
To use case-parent triad data to investigate if cerebral palsy (CP) is associated with variants of the APOE gene, the rs59007384 SNP of the TOMM40 gene or combined haplotypes of the two genes.
Study Design:
DNA was analyzed in buccal swabs from 235 children with CP, their parents and a sibling. The relative risks (RR) with 95% confidence intervals (CI) that the children would have a distribution of APOE genotypes, rs59007384 variants or combined haplotypes deviating from Mendelian inheritance were estimated.
Results:
Children with CP were more likely than expected to carry the APOEε3 allele (RR 7.5; CI: 0.99-53.7 for heterozygotes and 10.3; CI: 1.4-79.6 for homozygotes), and to have the haplotype of APOEε3 and rs59007384 G (RR 2.4; CI: 1-5.7 for heterozygotes, RR 3.7; CI: 1.4-9.5 for homozygotes) whereas the distribution was as expected for rs59007384 alone. In the subgroup analyses the findings were confined to children born preterm. Among siblings the distribution of these genes was as expected according to Mendelian inheritance.
Conclusion:
We speculate that children with APOEε2/APOEε4 alleles are more likely to die following cerebral injury in utero, resulting in a higher than expected proportion of children with CP carrying the APOEε3 allele.
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