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Combinatorial Synthesis of and High-throughput Protein Release from Polymer Film and Nanoparticle Libraries
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Templating carbohydrate-functionalised polymer-scaffolded dynamic combinatorial libraries with lectins.

Clare S Mahon1, Martin A Fascione, Chadamas Sakonsinsiri

  • 1Chemical Nanoscience Laboratory, School of Chemistry, Newcastle University, Newcastle-upon-Tyne, UK. david.fulton@ncl.ac.uk.

Organic & Biomolecular Chemistry
|January 20, 2015
PubMed
Summary
This summary is machine-generated.

New polymer-scaffolded dynamic combinatorial libraries (PS-DCLs) adapt their composition to bind specific lectins. This molecular recognition enhances binding affinity through preferential carbohydrate incorporation and strategic residue reorganization.

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Area of Science:

  • Biochemistry
  • Polymer Chemistry
  • Supramolecular Chemistry

Background:

  • Designing synthetic receptors for specific molecular recognition, particularly for carbohydrates, remains a significant challenge.
  • Dynamic combinatorial chemistry offers a powerful approach to generate molecular diversity and identify high-affinity binders.

Purpose of the Study:

  • To introduce a novel strategy for creating macromolecular receptors using polymer-scaffolded dynamic combinatorial libraries (PS-DCLs).
  • To demonstrate the ability of PS-DCLs to adapt their composition in response to lectin templates, leading to enhanced binding affinity.

Main Methods:

  • Preparation of PS-DCLs in aqueous solution via reversible conjugation of carbohydrate-acylhydrazides onto aldehyde-functionalised polymer scaffolds.
  • Exposure of PS-DCLs to specific lectin templates to induce compositional changes.
  • Affinity measurements to quantify the binding enhancements before and after templation.

Main Results:

  • PS-DCLs exhibited template-induced compositional changes, preferentially incorporating lectin-recognizing carbohydrate units.
  • Significant enhancements in binding affinity for the target lectins were observed, with free energy changes ranging from 5.2-8.8 kJ mol(-1).
  • Enhanced binding resulted from both increased display of preferred carbohydrates and strategic reorganization of polymer residues.

Conclusions:

  • PS-DCLs represent a conceptually new and effective approach for designing macromolecular receptors with tunable affinity for lectins.
  • The observed affinity enhancements highlight the synergistic effects of preferential binding unit display and structural reorganization induced by templation.