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windex: Analyzing Convergent Evolution Using the Wheatsheaf Index in R.

Kevin Arbuckle1, Amanda Minter1

  • 1Institute of Integrative Biology, University of Liverpool, Liverpool, Merseyside, UK.

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|March 4, 2015
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The windex R package offers new tools for analyzing convergent evolution using the Wheatsheaf index. This package quantifies evolutionary convergence strength, enabling new research possibilities.

Keywords:
convergencephenotypic evolutionphylogenetic comparative methodssoftware

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Area of Science:

  • Evolutionary Biology
  • Bioinformatics
  • Quantitative Biology

Background:

  • The windex package is a novel R package for analyzing convergent evolution.
  • It is freely available from CRAN and distributed under the GNU General Public License 2.0.

Purpose of the Study:

  • To introduce the windex package and its capabilities for evolutionary analysis.
  • To provide researchers with tools for quantitative assessment of evolutionary convergence.

Main Methods:

  • Implementation of the Wheatsheaf index for measuring convergence strength.
  • Development of functions for plotting and statistical testing within the R environment.

Main Results:

  • The windex package enables quantitative measurement of evolutionary convergence.
  • It facilitates the exploration of evolutionary phenomena through novel analytical tools.

Conclusions:

  • windex provides essential tools for the analysis of convergent evolution.
  • The package enhances research possibilities by offering quantitative measures and statistical tests.
  • Its integration within the R environment ensures broad accessibility and compatibility.