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Updated: Apr 16, 2026

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
Published on: August 14, 2018
Tree of life reveals clock-like speciation and diversification
S Blair Hedges1, Julie Marin2, Michael Suleski2
1Center for Biodiversity, Temple University Institute for Genomics and Evolutionary Medicine, Temple University Department of Biology, Temple University sbh@temple.edu.
Species diversity is expanding, contrary to previous findings. This study synthesized a global timetree of life, revealing constant diversification rates in eukaryotes and clock-like speciation in plants and animals, suggesting random events drive diversification.
Area of Science:
- Evolutionary Biology
- Genomics
- Phylogenetics
Background:
- Genomic data are crucial for constructing the timetree of life, a framework for scientific research.
- Previous studies on limited timetrees suggested declining diversification rates, often linked to ecological interactions.
- Potential biases like limited taxon sampling and clade size may have affected prior analyses.
Purpose of the Study:
- To synthesize a comprehensive global timetree of life.
- To examine patterns and rates of species diversification and speciation timing.
- To identify and mitigate biases in diversification analyses.
Main Methods:
- Synthesized data from 2,274 studies, encompassing 50,632 species.
- Constructed a global timetree of life.
- Analyzed diversification patterns, rates, and speciation timing, while accounting for potential biases.
Main Results:
- Species diversity has been expanding overall and within many smaller groups.
- The rate of diversification in eukaryotes has remained largely constant.
- Speciation intervals (time-to-speciation) for plants and animals are consistently around 2 million years.
Conclusions:
- Diversification and speciation appear to be driven primarily by random events.
- Adaptive change is likely a separate process from diversification.
- The findings provide a robust framework for understanding life's evolutionary history.
Related Concept Videos
The Tree of Life - Bacteria, Archaea, Eukaryotes
The Evidence for Evolution
Speciation Rates
Phylogeny
Evolutionary Relationships through Genome Comparisons
Microbial Phylogeny

