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The Ontology-Epistemology Divide: A Case Study in Medical Terminology
Olivier Bodenreider1, Barry Smith2, Anita Burgun3
1US National Library of Medicine, Bethesda, Maryland, USA.
Biomedical terms blend objective reality (ontology) with subjective perception (epistemology). This mix, especially epistemology-loaded terms, challenges consistent classification and alignment in medical vocabularies and ontologies.
Area of Science:
- Biomedical informatics
- Medical terminology
- Ontology engineering
Background:
- Medical terminology is crucial for organizing biomedical knowledge.
- Terms in vocabularies serve as labels for classes and reflect organizational principles.
- Biomedical terms encompass both invariant features (ontology) and subjective perceptions (epistemology).
Purpose of the Study:
- To analyze the interaction between ontological and epistemological components in biomedical terminologies.
- To identify how subjective perceptions influence the structure of medical terms.
- To understand the implications for biomedical vocabularies and ontologies.
Main Methods:
- Analysis of terms from multiple biomedical vocabularies.
- Categorization of terms based on their ontological and epistemological contributions.
- Identification of four distinct cases of term construction.
Main Results:
- Epistemology-loaded terms are prevalent in biomedical vocabularies.
- These terms often name classes that do not adhere to sound classification principles.
- Four categories of terms were identified: classification criteria, detectability/uncertainty, complete partition, and fiat boundaries.
Conclusions:
- The pervasive influence of epistemology in biomedical terms complicates classification.
- Inconsistent classification principles due to subjective terms can hinder terminology evolution.
- Alignment issues between terminologies and ontologies are likely exacerbated by epistemology-loaded terms.
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