Related Experiment Video
Updated: Apr 15, 2026

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
The Eya1 phosphatase promotes Shh signaling during hindbrain development and oncogenesis
Adriana Eisner1, Maria F Pazyra-Murphy1, Ershela Durresi2
1Departments of Cancer Biology and Pediatric Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02115, USA; Department of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Abstract:
Sonic hedgehog (Shh) signaling is critical in development and oncogenesis, but the mechanisms regulating this pathway remain unclear. Although protein phosphorylation clearly affects Shh signaling, little is known about phosphatases governing the pathway. Here, we conducted a small hairpin RNA (shRNA) screen of the phosphatome and identified Eya1 as a positive regulator of Shh signaling. We find that the catalytically active phosphatase Eya1 cooperates with the DNA-binding protein Six1 to promote gene induction in response to Shh and that Eya1/Six1 together regulate Gli transcriptional activators. We show that Eya1, which is mutated in a human deafness disorder, branchio-oto-renal syndrome, is critical for Shh-dependent hindbrain growth and development. Moreover, Eya1 drives the growth of medulloblastoma, a Shh-dependent hindbrain tumor. Together, these results identify Eya1 and Six1 as key components of the Shh transcriptional network in normal development and in oncogenesis.
Insights
Eya1, a phosphatase, acts with Six1 to regulate Sonic hedgehog (Shh) signaling. This pathway is crucial for hindbrain development and medulloblastoma growth, identifying Eya1 and Six1 as key regulators in both processes.
Area of Science:
- Molecular Biology
- Developmental Biology
- Cancer Research
Background:
- Sonic hedgehog (Shh) signaling is vital for embryonic development and cancer, but its regulatory mechanisms, particularly phosphatases, are not fully understood.
- Protein phosphorylation influences Shh signaling, yet the specific phosphatases involved remain largely uncharacterized.
Purpose of the Study:
- To identify phosphatases that regulate the Sonic hedgehog (Shh) signaling pathway.
- To elucidate the role of identified phosphatases in Shh-dependent development and oncogenesis.
Main Methods:
- Conducted a small hairpin RNA (shRNA) screen of the phosphatome to identify novel regulators of Shh signaling.
- Investigated the interaction and function of Eya1 and Six1 in regulating Gli transcriptional activators.
- Assessed the role of Eya1 in Shh-dependent hindbrain development and medulloblastoma growth.
Main Results:
- Identified Eya1 as a positive regulator of Shh signaling through an shRNA screen.
- Demonstrated that catalytically active Eya1 cooperates with Six1 to enhance gene induction in response to Shh.
- Showed that Eya1 and Six1 together regulate Gli transcriptional activators, impacting hindbrain development and medulloblastoma progression.
Conclusions:
- Eya1 and Six1 are identified as critical components of the Shh transcriptional network.
- Eya1 plays a crucial role in Shh-dependent hindbrain development and is implicated in medulloblastoma growth.
- These findings highlight Eya1 as a potential therapeutic target in Shh-driven cancers and developmental disorders.
Related Concept Videos
Hedgehog Signaling Pathway
Hedgehog Signaling Pathway
Regulation of Angiogenesis and Blood Supply
The JAK-STAT Signaling Pathway
Amplifying Signals via Enzymatic Cascade
Role of Ephrin-Eph Signalling in Intestinal Stem Cell Renewal

