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Updated: Apr 15, 2026

Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization
Published on: October 3, 2025
Genomic resources notes accepted 1 December 2014 - 31 January 2015
, Simon Blanchet1, Olivier Bouchez
1Station d'Ecologie Expérimentale du CNRS à Moulis, USR 2936, 09 200, Moulis, France; Université de Toulouse, UPS, UMR15174 (EDB), 118 route de Narbonne, 31062, Toulouse cedex 9, France.
Publicly available transcriptome data for rostrum dace infected with copepod parasites and single-nucleotide polymorphism (SNP) data for Ugandan red colobus are now accessible. This research provides valuable genomic resources for ecological and evolutionary studies.
Area of Science:
- Genomics
- Parasitology
- Evolutionary Biology
Background:
- Genomic data is crucial for understanding host-parasite interactions and population genetics.
- Publicly accessible datasets accelerate scientific discovery and enable comparative analyses.
Purpose of the Study:
- To document the public availability of novel genomic datasets.
- To provide sequence data for the rostrum dace (Leuciscus burdigalensis) and SNP data for the Ugandan red colobus (Procolobus rufomitratus tephrosceles).
Main Methods:
- Transcriptome sequencing and assembly were performed on rostrum dace infected with Tracheliastes polycolpus.
- Restriction-site-associated DNA (RAD) sequencing was utilized to identify and validate single-nucleotide polymorphisms (SNPs) in the Ugandan red colobus.
Main Results:
- Complete transcriptome sequence data and assembly for the rostrum dace are now publicly available.
- Validated SNPs identified through RAD sequencing for the Ugandan red colobus are also publicly accessible.
- These datasets represent significant contributions to the genomic resources for these species.
Conclusions:
- The public release of these genomic datasets facilitates further research into host-parasite dynamics and primate population genetics.
- Researchers can now utilize these resources for various downstream analyses, including evolutionary studies and conservation efforts.
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