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Identification of indels in next-generation sequencing data.

Aakrosh Ratan1,2, Thomas L Olson3, Thomas P Loughran4

  • 1Center for Comparative Genomics and Bioinformatics, Pennsylvania State University, 506, Wartik Laboratory, University Park, PA, 16802, USA. ratan@bx.psu.edu.

BMC Bioinformatics
|April 17, 2015
PubMed
Summary

Identifying insertion-deletion variants (indels) is challenging. We developed indelMINER, a new tool that effectively detects indels from whole-genome sequencing data, outperforming existing methods.

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