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Sequencing Small Non-coding RNA from Formalin-fixed Tissues and Serum-derived Exosomes from Castration-resistant Prostate Cancer Patients
Published on: November 19, 2019
Targeting chromatin binding regulation of constitutively active AR variants to overcome prostate cancer resistance to
Siu Chiu Chan1, Luke A Selth2, Yingming Li1
1Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55905, USA.
Abstract:
Androgen receptor (AR) variants (AR-Vs) expressed in prostate cancer (PCa) lack the AR ligand binding domain (LBD) and function as constitutively active transcription factors. AR-V expression in patient tissues or circulating tumor cells is associated with resistance to AR-targeting endocrine therapies and poor outcomes. Here, we investigated the mechanisms governing chromatin binding of AR-Vs with the goal of identifying therapeutic vulnerabilities. By chromatin immunoprecipitation and sequencing (ChIP-seq) and complementary biochemical experiments, we show that AR-Vs display a binding preference for the same canonical high-affinity androgen response elements (AREs) that are preferentially engaged by AR, albeit with lower affinity. Dimerization was an absolute requirement for constitutive AR-V DNA binding and transcriptional activation. Treatment with the bromodomain and extraterminal (BET) inhibitor JQ1 resulted in inhibition of AR-V chromatin binding and impaired AR-V driven PCa cell growth in vitro and in vivo. Importantly, this was associated with a novel JQ1 action of down-regulating AR-V transcript and protein expression. Overall, this study demonstrates that AR-Vs broadly restore AR chromatin binding events that are otherwise suppressed during endocrine therapy, and provides pre-clinical rationale for BET inhibition as a strategy for inhibiting expression and chromatin binding of AR-Vs in PCa.
Insights
Androgen receptor variants (AR-Vs) drive prostate cancer (PCa) resistance. BET inhibitor JQ1 blocks AR-V DNA binding and reduces AR-V expression, offering a potential new therapy for PCa.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Androgen receptor variants (AR-Vs) lack the ligand-binding domain and are constitutively active transcription factors.
- AR-V expression in prostate cancer (PCa) correlates with endocrine therapy resistance and poor patient outcomes.
- Understanding AR-V chromatin binding mechanisms is crucial for identifying therapeutic vulnerabilities.
Purpose of the Study:
- To investigate the mechanisms governing AR-V chromatin binding.
- To identify potential therapeutic targets for inhibiting AR-V activity in PCa.
Main Methods:
- Chromatin immunoprecipitation and sequencing (ChIP-seq) to map AR-V binding sites.
- Biochemical experiments to assess AR-V DNA binding requirements.
- In vitro and in vivo studies using prostate cancer cell models and BET inhibitor JQ1.
Main Results:
- AR-Vs bind to canonical androgen response elements (AREs), similar to the full-length androgen receptor (AR), but with lower affinity.
- AR-V dimerization is essential for constitutive DNA binding and transcriptional activation.
- JQ1 treatment inhibited AR-V chromatin binding, reduced AR-V expression (transcript and protein), and impaired PCa cell growth.
- AR-Vs restore AR chromatin binding events suppressed by endocrine therapy.
Conclusions:
- AR-Vs broadly re-establish AR chromatin binding suppressed during endocrine therapy.
- BET inhibition, specifically with JQ1, represents a promising pre-clinical strategy to target AR-V expression and chromatin binding in PCa.
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