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MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation

Yu-Chieh Liao1, Hsin-Hung Lin1, Amarpreet Sabharwal2

  • 1Division of Biostatistics and Bioinformatics, Institute of Population Health Sciences, National Health Research Institutes, Miaoli County, Taiwan.

Journal of Microbiological Methods
|April 26, 2015
PubMed

Keywords:
AnnotationAssemblyBioinformaticsProkaryoteWhole genome sequencing

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The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
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