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Updated: Apr 13, 2026

Analysis of Translation Initiation During Stress Conditions by Polysome Profiling
Published on: May 19, 2014
Human ribosomes from cells with reduced dyskerin levels are intrinsically altered in translation
Marianna Penzo1, Laura Rocchi1, Sabine Brugiere1
1*Department of Experimental, Diagnostic, and Specialty Medicine, Alma Mater Studiorum-Università di Bologna, Bologna, Italy; University Grenoble Alpes, Commissariat à l'Énergie Atomique, Institut Régional de Travail Social, and Institut National de la Santé et de la Recherche Médicale, Biologie à Grande Echelle, Grenoble, France.
Abstract:
Dyskerin is a pseudouridine (ψ) synthase involved in fundamental cellular processes including uridine modification in rRNA and small nuclear RNA and telomere stabilization. Dyskerin functions are altered in X-linked dyskeratosis congenita (X-DC) and cancer. Dyskerin's role in rRNA pseudouridylation has been suggested to underlie the alterations in mRNA translation described in cells lacking dyskerin function, although relevant direct evidences are currently lacking. Our purpose was to establish definitely whether defective dyskerin function might determine an intrinsic ribosomal defect leading to an altered synthetic activity. Therefore, ribosomes from dyskerin-depleted human cells were purified and 1) added to a controlled reticulocyte cell-free system devoid of ribosomes to study mRNA translation; 2) analyzed for protein contamination and composition by mass spectrometry, 3) analyzed for global pseudouridylation levels. Ribosomes purified from dyskerin-depleted cells showed altered translational fidelity and internal ribosome entry site (IRES)-mediated translation. These ribosomes displayed reduced uridine modification, whereas they were not different in terms of protein contamination or ribosomal protein composition with respect to ribosomes from matched control cells with full dyskerin activity. In conclusion, lack of dyskerin function in human cells induces a defect in rRNA uridine modification, which is sufficient to alter ribosome activity.
Insights
Dyskerin depletion impairs ribosome function by reducing uridine modification in ribosomal RNA (rRNA). This defect in rRNA pseudouridylation directly impacts mRNA translation and protein synthesis.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- Dyskerin is a key enzyme for uridine modification in rRNA and small nuclear RNA, essential for cellular processes.
- Dyskerin dysfunction is linked to X-linked dyskeratosis congenita (X-DC) and cancer.
- Previous studies suggested dyskerin's role in mRNA translation alterations, but direct evidence was lacking.
Purpose of the Study:
- To definitively determine if impaired dyskerin function causes intrinsic ribosomal defects affecting protein synthesis.
- To investigate the direct impact of dyskerin depletion on ribosome activity and composition.
Main Methods:
- Purification of ribosomes from dyskerin-depleted human cells.
- Assessing mRNA translation using a reticulocyte cell-free system.
- Analyzing ribosome protein contamination and composition via mass spectrometry.
- Quantifying global pseudouridylation levels in purified ribosomes.
Main Results:
- Dyskerin-depleted ribosomes exhibited altered translational fidelity and internal ribosome entry site (IRES)-mediated translation.
- These ribosomes showed significantly reduced uridine modification (pseudouridylation).
- No differences were observed in protein contamination or ribosomal protein composition compared to control ribosomes.
Conclusions:
- Dyskerin deficiency directly induces a defect in rRNA uridine modification within human cells.
- This rRNA modification defect is sufficient to alter ribosome activity and mRNA translation.
- The findings establish a direct link between dyskerin function, rRNA pseudouridylation, and ribosome synthetic activity.
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