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Updated: Apr 12, 2026

Comparative Analysis of Automatic Fecal Analyzer versus Direct Wet Smear Microscopy for Detecting Parasitic Infections in Stool Samples
Published on: April 25, 2025
A comparative study of bacterial and parasitic intestinal infections in India
Beena Uppal1, Naz Perween2, Prabhav Aggarwal2
1Director Professor, Department of Microbiology, Maulana Azad Medical College New Delhi, India .
Background:
Infectious diarrhea causes a major health problem in developing countries with significant morbidity and mortality. Very often, rehydration therapy alone does not suffice, mandating the use of antimicrobial agents. However, rapidly decreasing antimicrobial susceptibility is complicating the matters.
Materials And Methods:
The study aimed to determine the prevalent bacterial and parasitic agents of diarrhea in India. A cross-sectional study was done at Maulana Azad Medical College and associated Lok Nayak Hospital, New Delhi, during 2012-14. Stool samples were received from patients of all age groups and processed for bacteriological and parasitological identification by microscopy, bacterial culture, biochemical identification, serotyping and antimicrobial susceptibility tests. The study also aimed to identify the recent papers (after year 2000) reporting aetiology of infectious diarrhea in India involving the general population as a whole and compare them with present findings.
Results:
Out of 6527 samples, 581 (8.90%) were positive for bacterial pathogens. A total of 280 samples (of 3823 under-five year children) were positive for diarrheagenic Escherichia coli. Other organisms like Vibrio cholera were found in 159 (2.44%) cases, Shigella spp. in 126 (1.93%), Salmonella Typhi in 7 (0.11%), Salmonella Typhimurium in 6 (0.10%), Aeromonas hydrophila in 3 (0.05%) cases. Levels of resistance to nalidixic acid, amoxicillin and ciprofloxacin were alarmingly high. Third generation cephalosporins were seen to be moderately active except against E. coli. Parasites were identified in 312 (4.78%) cases. Giardia intestinalis, Ascaris lumbricoides and Entamoeba histolytica were identified in 2.27%, 1.15% and 0.64% cases respectively.
Conclusion:
Analysis of recent nationwide studies revealed V. cholerae was the most common bacterial/parasitic agent of diarrhea across all populations, being followed by diarrheagenic E. coli and Giardia intestinalis. Periodic laboratory monitoring of antimicrobial susceptibility pattern is essential, as is formulation of effective antibiotic use policy.
Insights
Infectious diarrhea in India is a significant health issue. Vibrio cholerae, diarrheagenic Escherichia coli, and Giardia intestinalis are common causes, with concerning antimicrobial resistance patterns necessitating policy updates.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Public Health
Background:
- Infectious diarrhea presents a major health challenge in developing nations, marked by high morbidity and mortality.
- While rehydration is crucial, antimicrobial agents are often necessary, yet decreasing susceptibility complicates treatment.
- Understanding the etiological agents and their resistance patterns is vital for effective management.
Purpose of the Study:
- To identify prevalent bacterial and parasitic causes of diarrhea in India.
- To assess antimicrobial susceptibility patterns of identified pathogens.
- To compare current findings with recent national studies on infectious diarrhea etiology.
Main Methods:
- A cross-sectional study involving stool sample analysis from patients of all age groups.
- Bacteriological and parasitological identification using microscopy, culture, biochemical tests, and serotyping.
- Antimicrobial susceptibility testing and comparison with literature published after 2000.
Main Results:
- Bacterial pathogens were found in 8.90% of 6527 samples, with diarrheagenic Escherichia coli (7.32%), Vibrio cholerae (2.44%), and Shigella spp. (1.93%) being most common.
- Parasites were identified in 4.78% of samples, with Giardia intestinalis (2.27%), Ascaris lumbricoides (1.15%), and Entamoeba histolytica (0.64%) being prevalent.
- High resistance to nalidixic acid, amoxicillin, and ciprofloxacin was observed; third-generation cephalosporins showed moderate activity.
Conclusions:
- Vibrio cholerae, diarrheagenic E. coli, and Giardia intestinalis are key agents of infectious diarrhea in India.
- Alarming antimicrobial resistance necessitates continuous laboratory monitoring of susceptibility patterns.
- Development and implementation of effective antibiotic use policies are crucial for combating infectious diarrhea.
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