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A coarse-grain force-field for xylan and its interaction with cellulose
Liang Li1, Patrick Pérré2, Xavier Frank3
1LERFoB, AgroParisTech ENGREF, 14 Rue Girardet, 54000 Nancy, France.
We developed a coarse-grain model for xylan interacting with cellulose surfaces. This model accurately predicts xylan behavior, revealing new coiled structures on hydrophobic cellulose.
Area of Science:
- Biomolecular Modeling
- Materials Science
- Computational Chemistry
Background:
- Xylan and cellulose are key plant cell wall components.
- Understanding their interactions is crucial for biomass processing.
- Atomistic models are computationally expensive for large systems.
Purpose of the Study:
- To develop and validate a coarse-grain (CG) model for xylan adsorption on crystalline cellulose.
- To investigate the structural behavior of xylan on different cellulose surfaces using CG simulations.
Main Methods:
- A coarse-grain model representing xylosyl/glucosyl units as single beads was constructed.
- Force-field parameters were derived from atomistic simulations of xylan fragments.
- The CG model was validated against atomistic simulations and experimental data for isolated and adsorbed xylan.
Main Results:
- The CG model accurately reproduced xylan chain conformations in isolation and bulk.
- Simulations showed good agreement with experimental measurements for xylan adsorption on the cellulose (110) surface.
- Extended xylan structures were observed on cellulose, along with novel coiled conformations, particularly on hydrophobic surfaces.
Conclusions:
- The developed CG model provides an efficient and accurate tool for studying xylan-cellulose interactions.
- The model reveals that xylan can adopt diverse conformations, including coiled structures, on crystalline cellulose surfaces.
- This finding has implications for understanding biomass structure and developing new biomass utilization strategies.
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