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Published on: May 29, 2021
Design and Development of ChemInfoCloud: An Integrated Cloud Enabled Platform for Virtual Screening
Muthukumarasamy Karthikeyan1, Deepak Pandit, Arvind Bhavasar
1Digital Information Resource Centre (DIRC) & Centre of Excellence in Scientific Computing (CoESC) CSIR-National Chemical Laboratory Pune - 411008 India. m.karthikeyan@ncl.res.in.
ChemInfoCloud leverages cloud and distributed computing for virtual screening. This platform integrates chemoinformatics and bioinformatics tools for efficient drug discovery, including lead generation and property prediction.
Area of Science:
- Computational chemistry
- Bioinformatics
- Drug discovery
Background:
- Virtual screening requires processing vast, heterogeneous data.
- Existing platforms may lack integrated chemoinformatics and bioinformatics tools.
Purpose of the Study:
- To develop an integrated cloud environment, ChemInfoCloud, for virtual screening.
- To enhance efficiency in lead generation, optimization, and property prediction.
Main Methods:
- Utilized cloud and distributed computing architectures.
- Integrated chemoinformatics tools (lead generation, optimization, property prediction).
- Incorporated bioinformatics functionalities (sequence alignment, docking) and text mining modules.
Main Results:
- ChemInfoCloud provides a robust engine for fast and efficient chemoinformatics tasks.
- The platform supports bioinformatics functions like protein-ligand docking.
- Modules for text mining and NMR prediction facilitate lead discovery.
Conclusions:
- ChemInfoCloud offers an integrated solution for virtual screening studies.
- Container-based virtualization (OpenVZ) ensures workflow management and usability.
- The platform enhances interaction with end-users in computational drug discovery.
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