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1Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet, Barcelona, Catalonia, Spain.
Abstract:
Most diseases, including human cancer, are frequently associated with an altered transcription pattern. The alteration of the transcriptome is not restricted to the production of aberrant levels of protein-coding RNAs, but also refers to the dysregulation of the expression of the multiple noncoding members that comprise the human genome. Unexpectedly, recent RNA-seq data of the human transcriptome have revealed that less than 2% of the genome encodes protein-coding transcripts, even though the vast majority of the genome is actively transcribed into non-coding RNAs (ncRNAs) under different conditions. In this review, we present an updated version of the mechanistic aspects of some long non-coding RNAs (lncRNAs) that play critical roles in human cancer. Most importantly, we focus on the interplay between lncRNAs and microRNAs, and the importance of such interactions during the tumorigenic process, providing new insight into the regulatory mechanisms underlying several ncRNA classes of importance in cancer, particularly transcribed ultraconserved regions (T-UCRs). This article is part of a Special Issue entitled: Clues to long noncoding RNA taxonomy1, edited by Dr. Tetsuro Hirose and Dr. Shinichi Nakagawa.
Insights
Long non-coding RNAs (lncRNAs) are crucial in human cancer, with interactions between lncRNAs and microRNAs offering new insights into tumorigenic processes and regulatory mechanisms.
Area of Science:
- Molecular Biology
- Genomics
- Cancer Research
Background:
- Human diseases, including cancer, exhibit altered transcription patterns.
- Transcriptome alterations involve both protein-coding and non-coding RNAs.
- The human genome is largely transcribed into non-coding RNAs (ncRNAs), with less than 2% encoding proteins.
Purpose of the Study:
- To review mechanistic aspects of long non-coding RNAs (lncRNAs) in human cancer.
- To highlight the interplay between lncRNAs and microRNAs in tumorigenesis.
- To provide insights into regulatory mechanisms of ncRNAs, such as transcribed ultraconserved regions (T-UCRs), in cancer.
Main Methods:
- Review of recent RNA-seq data on the human transcriptome.
- Analysis of mechanistic roles of specific lncRNAs in cancer.
- Focus on interactions between lncRNAs and microRNAs.
Main Results:
- lncRNAs play critical roles in human cancer development.
- The interaction between lncRNAs and microRNAs is significant in the tumorigenic process.
- Specific ncRNA classes, including T-UCRs, are important in cancer regulation.
Conclusions:
- lncRNAs are key regulators in human cancer.
- Understanding lncRNA-microRNA interactions provides novel insights into cancer mechanisms.
- Further research into ncRNA classes like T-UCRs is essential for cancer biology.
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