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Methodology for Accurate Detection of Mitochondrial DNA Methylation
Published on: May 20, 2018
AZT-induced mitochondrial toxicity: an epigenetic paradigm for dysregulation of gene expression through mitochondrial
Christopher A Koczor1, Zhe Jiao2, Earl Fields2
1Department of Pathology, Emory University, Atlanta, Georgia ckoczor@emory.edu.
Abstract:
Mitochondrial dysfunction causes oxidative stress and cardiomyopathy. Oxidative stress also is a side effect of dideoxynucleoside antiretrovirals (NRTI) and is observed in NRTI-induced cardiomyopathy. We show here that treatment with the NRTI AZT {1-[(2R,4S,5S)-4-azido-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione} modulates cardiac gene expression epigenetically through production of mitochondrially derived reactive oxygen species. Transgenic mice with ubiquitous expression of mitochondrially targeted catalase (MCAT) and C57Bl/6 wild-type mice littermates (WT) were administered AZT (0.22 mg/day po, 35 days), and cardiac DNA and mRNA were isolated. In AZT-treated WT, 95 cardiac genes were differentially expressed compared with vehicle-treated WTs. When MCAT mice were treated with AZT, each of those 95 genes reverted toward the expression of vehicle-treated WTs. In AZT-treated WT hearts, Mthfr [5,10-methylenetetrahydrofolate reductase; a critical enzyme in synthesis of methionine cycle intermediates including S-adenosylmethionine (SAM)], was overexpressed. Steady-state abundance of SAM in cardiac extracts from AZT-treated MCAT mice increased 60% above that of vehicle-treated MCAT. No such change occurred in WT. AZT caused hypermethylation (47%) and hypomethylation (53%) of differentially methylated DNA regions in WT cardiac DNA. AZT-treated MCAT heart DNA exhibited greater hypermethylation (91%) and less hypomethylation (9%) compared with vehicle-treated MCAT controls. The gene encoding protein kinase C-α displayed multifocal epigenetic regulation caused by oxidative stress. Results show that mitochondrially derived oxidative stress in the heart hinders cardiac DNA methylation, alters steady-state abundance of SAM, alters cardiac gene expression, and promotes characteristic pathophysiological changes of cardiomyopathy. This mechanism for NRTI toxicity offers insight into long-term side effects from these commonly used antiviral agents.
Insights
Mitochondrial dysfunction from antiviral drugs like AZT causes heart damage by altering gene expression and DNA methylation. Protecting mitochondria with catalase reversed these harmful epigenetic changes and gene expression patterns.
Area of Science:
- Cardiovascular Biology
- Molecular Toxicology
- Epigenetics
Background:
- Mitochondrial dysfunction is linked to oxidative stress and cardiomyopathy.
- Oxidative stress is a known side effect of nucleoside reverse transcriptase inhibitors (NRTIs), contributing to NRTI-induced cardiomyopathy.
- The epigenetic mechanisms underlying NRTI-induced cardiac toxicity remain incompletely understood.
Purpose of the Study:
- To investigate the role of mitochondrially derived reactive oxygen species (ROS) in AZT-induced epigenetic modulation of cardiac gene expression.
- To determine if protecting mitochondria from oxidative stress can prevent AZT-induced cardiac gene expression changes and epigenetic alterations.
- To elucidate the impact of AZT on DNA methylation and S-adenosylmethionine (SAM) levels in the heart.
Main Methods:
- Administration of AZT to wild-type (WT) mice and transgenic mice expressing mitochondrially targeted catalase (MCAT).
- Isolation and analysis of cardiac DNA and mRNA to assess gene expression and DNA methylation patterns.
- Quantification of S-adenosylmethionine (SAM) levels in cardiac extracts.
Main Results:
- AZT treatment altered the expression of 95 cardiac genes in WT mice, effects that were reversed in MCAT mice.
- AZT-induced overexpression of Mthfr (5,10-methylenetetrahydrofolate reductase) in WT hearts, leading to altered SAM levels.
- AZT treatment caused significant changes in DNA methylation patterns (hypermethylation and hypomethylation) in WT hearts, which were mitigated in MCAT mice.
Conclusions:
- Mitochondrially derived oxidative stress hinders cardiac DNA methylation and alters SAM levels, impacting cardiac gene expression.
- Epigenetic dysregulation driven by mitochondrial oxidative stress is a key mechanism in NRTI-induced cardiomyopathy.
- Targeting mitochondrial oxidative stress may offer a therapeutic strategy to mitigate long-term side effects of NRTIs.
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