CITED4 gene silencing in colorectal cancer cells modulates adherens/tight junction gene expression and reduces cell proliferation
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Updated: Apr 6, 2026

Discovery of Driver Genes in Colorectal HT29-derived Cancer Stem-Like Tumorspheres
Published on: July 22, 2020
Michael A Rogers1, Verena Kalter1, Gemma Marcias1
1Division of Molecular Genetics (B060), German Cancer Research Center, Im Neuenheimer Feld 580, 69120, Heidelberg, Germany.
Purpose:
CITED4 is one member of a family of transcriptional cofactors, several of which are deregulated in a variety of tumors, including colorectal cancer (CRC). We modulated CITED4 expression, in vitro, and analyzed the associated phenotypic and gene expression changes.
Methods:
CITED4-overexpressing and shRNA-mediated knockdown cell lines and control cell lines were established in the CRC cell line SW480. The cells were analyzed for changes in proliferation, apoptosis/cell cycle, migration, invasion, colony formation and adhesion. mRNA expression changes were determined by microarray and pathway analysis, and several deregulated genes were validated by qRT-PCR and Western blotting. Based on results obtained from these studies, the status of the actin cytoskeleton was evaluated by phalloidin/vinculin staining.
Results:
Phenotypically, the CITED4-overexpressing cell line showed only moderate changes in adhesion. Microarray analysis identified several deregulated genes, including several G protein-coupled receptors. Phenotypic analysis of the CITED4 shRNA knockdown cell line demonstrated decreased cell proliferation and G2 cell cycle blockage. Microarray analysis identified many deregulated genes, and pathway analysis discovered genes linked to actin-associated adherens junctions/tight junctions (claudin-4, claudin-7, ezrin, MET, ß-catenin). Phenotypically, no morphological changes of the actin cytoskeleton were seen.
Conclusions:
Upregulation of CITED4 in SW480 resulted in no obvious phenotype. CITED4 shRNA-mediated knockdown led to decreased cellular proliferation and modulation of a large number of genes, including the c-MET tyrosine kinase and several actin-associated adherens junctions/tight junction genes.
Insights
Knocking down CITED4 in colorectal cancer cells reduced proliferation and altered genes involved in cell junctions. CITED4 overexpression had minimal effects, suggesting a role in cancer progression.
Area of Science:
- Molecular Biology
- Cancer Research
- Cell Biology
Background:
- CITED4 is a transcriptional cofactor implicated in various cancers, including colorectal cancer (CRC).
- Dysregulation of cofactor expression is a common feature in tumor development.
- Understanding CITED4's role is crucial for potential therapeutic strategies in CRC.
Purpose of the Study:
- To investigate the functional consequences of modulating CITED4 expression in colorectal cancer cells.
- To analyze the phenotypic and gene expression changes associated with CITED4 overexpression and knockdown.
- To identify specific molecular pathways affected by CITED4 in CRC cells.
Main Methods:
- Established CITED4-overexpressing and shRNA-knockdown SW480 colorectal cancer cell lines.
- Assessed cellular proliferation, apoptosis, cell cycle, migration, invasion, colony formation, and adhesion.
- Utilized microarray analysis for gene expression profiling and pathway analysis.
- Validated key gene expression changes using qRT-PCR and Western blotting.
- Examined actin cytoskeleton dynamics via phalloidin/vinculin staining.
Main Results:
- CITED4 overexpression in SW480 cells resulted in moderate adhesion changes.
- Knockdown of CITED4 led to decreased cell proliferation and G2 cell cycle arrest.
- Microarray analysis revealed deregulation of G protein-coupled receptors and genes associated with adherens and tight junctions (e.g., claudins, ezrin, MET, ß-catenin).
- No significant alterations in actin cytoskeleton morphology were observed.
Conclusions:
- CITED4 upregulation in SW480 cells did not induce an obvious phenotype.
- CITED4 knockdown significantly impacted cell proliferation and modulated numerous genes, including c-MET and adherens/tight junction components.
- These findings highlight CITED4's complex role in colorectal cancer, particularly its impact on cell cycle and junctional pathways.
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