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miRNA778 and SUVH6 are involved in phosphate homeostasis in Arabidopsis
Lei Wang1, Hou Qing ZengJ2, Jun Song1
1Department of Biochemistry and Molecular Biology, College of Life Science, Nanjing Agricultural University, Nanjing 210095, China.
Abstract:
microRNAs (miRNAs) play an important role in plant adaptation to phosphate (Pi) starvation. Histone methylation can remodel chromatin structure and mediate gene expression. This study identified Arabidopsis miR778, a Pi-responsive miRNA, and its target gene Su(var) 3-9 homologs 6 (SUVH6) encoding a histone H3 lysine 9 (H3K9) methyltransferase. Overexpression of miR778 moderately enhanced primary and lateral root growth, free phosphate accumulation in shoots, and accumulation of anthocyanin under Pi deficient conditions. miR778 overexpression relieved the arrest of columella cell development under Pi starvation. Conversely, transgenic plants overexpressing a miR778-target mimic (35S::MIM778), that act as a sponge and sequesters miR778, showed opposite phenotypes of 35S::miR778 plants under Pi deficiency. Expression of several Pi deficiency-responsive genes such as miR399, Phosphate Transporter (PHT1;4), Low Phosphate-Resistant1 (LPR1) and Production of Anthocyanin Pigment 1 (PAP1) were elevated in the miR778 overexpressing plants, suggesting that both miR778 and SUVH6 are involved in phosphate homeostasis in plants. This study has provided a basis for further investigation on how SUVH6 regulates its downstream genes through chromatin remodeling and DNA methylation in plants stressed by Pi deficiency.
Insights
microRNAs (miRNAs) regulate plant adaptation to phosphate starvation. This study shows miR778 enhances root growth and phosphate uptake by targeting SUVH6, a histone methyltransferase, improving plant Pi homeostasis.
Area of Science:
- Plant Biology
- Molecular Biology
- Epigenetics
Background:
- MicroRNAs (miRNAs) are crucial for plant adaptation to environmental stresses, including phosphate (Pi) deficiency.
- Histone methylation is a key epigenetic mechanism that regulates chromatin structure and gene expression.
Purpose of the Study:
- To identify and characterize Pi-responsive miRNAs in Arabidopsis.
- To investigate the role of miR778 and its target gene SUVH6 in plant response to Pi starvation.
- To elucidate the involvement of histone methylation in Pi homeostasis.
Main Methods:
- Identification of Pi-responsive miRNAs in Arabidopsis.
- Gene expression analysis of miR778 and its target SUVH6.
- Generation and phenotypic analysis of transgenic Arabidopsis plants overexpressing miR778 or a miR778-target mimic.
- Analysis of root growth, phosphate content, and anthocyanin accumulation.
Main Results:
- Arabidopsis miR778 was identified as a Pi-responsive miRNA targeting SUVH6, a histone H3 lysine 9 (H3K9) methyltransferase.
- Overexpression of miR778 enhanced root growth, shoot phosphate content, and anthocyanin accumulation under Pi deficiency.
- miR778 overexpression also relieved developmental arrest in columella cells and upregulated Pi-responsive genes (e.g., miR399, PHT1;4, LPR1, PAP1).
- Conversely, plants overexpressing a miR778-target mimic exhibited opposite phenotypes.
Conclusions:
- miR778 plays a significant role in regulating plant adaptation to phosphate deficiency.
- SUVH6, targeted by miR778, is involved in modulating phosphate homeostasis through epigenetic mechanisms.
- This study provides insights into the epigenetic regulation of plant responses to nutrient stress.
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