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Updated: Apr 5, 2026

An Integrated Platform for Genome-wide Mapping of Chromatin States Using High-throughput ChIP-sequencing in Tumor Tissues
Published on: April 5, 2018
Synovial sarcoma is a gateway to the role of chromatin remodeling in cancer
Stefan K Zöllner1,2, Claudia Rössig2, Jeffrey A Toretsky3,4
1Department of Oncology, Georgetown University, Research Building, Suite E501, 3970 Reservoir Road, N.W., Washington, DC, 20057, USA.
Abstract:
Patients afflicted with synovial sarcoma share the fate of other translocation positive sarcomas; the driver mutation for this cancer is known, yet no means to target the fusion protein SS18-SSX directly exist. Current chemotherapeutic regimens are minimally beneficial, particularly in patients with metastatic disease. SS18-SSX putatively promotes its oncogenic activity through protein-protein interactions that alter genetic programs through chromatin remodeling. This review discusses the functional protein network of SS18-SSX, both wild-type and fusion protein, considers its intrinsically disordered nature, and provides insights into potential therapeutic strategies. A comprehensive overview of the clinical characteristics reveals the need for newly targeted therapeutics based upon oncogenic transformation by the fusion protein SS18-SSX. The wild-type, non-fused proteins SS18 and SSX are presented including their molecular structure and biological function with regard to protein-protein interactions. The interactions of the wild-type proteins inform the oncogenic changes of the fusion protein. The SS18-SSX fusion protein and its protein interactions are described and evaluated for their biological consequences that lead to oncogenesis. This review illustrates the key protein interactions of SS18-SSX that may qualify as primary targets for small molecule-based disruption leading to the development of SS18-SSX-specific drugs. These novel targeted therapeutics may provide a specificity that ultimately improves survival while reducing morbidity of patients with synovial sarcoma.
Insights
Targeting the SS18-SSX fusion protein in synovial sarcoma is crucial. This review explores SS18-SSX interactions to identify potential therapeutic targets for improved patient survival.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Synovial sarcoma is driven by the SS18-SSX fusion protein, but direct targeting methods are lacking.
- Current treatments offer limited benefit, especially for metastatic disease.
- SS18-SSX oncogenic activity is mediated by protein-protein interactions affecting chromatin remodeling.
Purpose of the Study:
- To review the functional protein network of SS18-SSX and wild-type SS18 and SSX proteins.
- To analyze the intrinsically disordered nature of SS18-SSX.
- To identify potential therapeutic strategies targeting SS18-SSX interactions.
Main Methods:
- Review of existing literature on SS18-SSX, SS18, and SSX proteins.
- Analysis of protein-protein interactions and their role in oncogenesis.
- Evaluation of SS18-SSX biological consequences and potential drug targets.
Main Results:
- Detailed presentation of SS18 and SSX wild-type proteins, their structures, and functions.
- Description of SS18-SSX fusion protein interactions and their oncogenic impact.
- Identification of key SS18-SSX interactions as potential targets for small molecule disruption.
Conclusions:
- Novel therapeutics targeting SS18-SSX interactions are needed for synovial sarcoma.
- Small molecule-based disruption of SS18-SSX targets may lead to specific drugs.
- These targeted therapies hold promise for improving survival and reducing morbidity in patients.
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