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Related Concept Videos

Protein Dynamics in Living Cells01:19

Protein Dynamics in Living Cells

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Different fluorescence-based techniques are used to study the protein dynamics in living cells. These techniques include FRAP, FRET, and PET.
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
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Related Experiment Video

Updated: Apr 4, 2026

Fluorescent End-Labeling and Encapsulation of Long RNAs for Single-Molecule FRET-TIRF Microscopy
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Visualizing double-stranded RNA distribution and dynamics in living cells by dsRNA binding-dependent fluorescence

Xiaofei Cheng1, Ping Deng2, Hongguang Cui2

  • 1Southern Crop Protection and Food Research Centre, Agriculture and Agri-Food Canada, London, Ontario N5V 4T3, Canada; College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 310036, PR China.

Virology
|September 10, 2015
PubMed
Summary

Scientists developed a new method to visualize double-stranded RNA (dsRNA) in living cells. This dsRNA binding-dependent fluorescence complementation (dRBFC) assay tracks viral RNA dynamics in real-time.

Keywords:
BiFCD-bodiesDouble-stranded RNAFluorescent proteinLive-cell imagingPositive-sense RNA virusRDR6RNA binding proteinSGS3Viral replication complex

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Area of Science:

  • Molecular Biology
  • Virology
  • Cell Biology

Background:

  • Double-stranded RNA (dsRNA) is crucial for eukaryotic cellular processes and a key indicator of positive-sense RNA virus infections.
  • Existing technologies lack the capability for in vivo visualization of dsRNA within living cells.

Purpose of the Study:

  • To develop and validate a novel in vivo technology for monitoring dsRNA distribution and dynamics.
  • To enable real-time visualization of viral RNA replication intermediates.

Main Methods:

  • Developed a dsRNA binding-dependent fluorescence complementation (dRBFC) assay.
  • Engineered fusion proteins comprising dsRNA-binding domains and split yellow fluorescent protein (YFP) halves.
  • Utilized YFP reconstitution upon dsRNA binding to signal the presence of dsRNA.

Main Results:

  • Successfully visualized dsRNA distribution and dynamics in living cells using the dRBFC assay.
  • Demonstrated the system's ability to monitor the replicative RNA intermediates of positive-sense RNA viruses.
  • Confirmed that binding of fusion proteins to dsRNA restores YFP fluorescence.

Conclusions:

  • The dRBFC assay provides an efficient tool for in vivo dsRNA visualization.
  • This technology facilitates the study of viral RNA replication and cellular dsRNA roles.
  • Enables real-time tracking of dsRNA in living systems.