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Influence of Thin Slice Reconstruction on CT Brain Perfusion Analysis
Edwin Bennink1, Jaap Oosterbroek1, Alexander D Horsch2
1Department of Radiology, University Medical Center Utrecht, Utrecht, the Netherlands; Image Sciences Institute, University Medical Center Utrecht, Utrecht, the Netherlands.
Plos One
|September 12, 2015
Summary
Thin slice CT perfusion (CTP) reconstruction impacts absolute perfusion values, particularly cerebral blood flow (CBF) and volume (CBV), due to partial volume effects. Relative values remain largely unaffected, suggesting thin slices are viable for CTP analysis.
Area of Science:
- Neuroimaging
- Radiology
- Medical Physics
Background:
- CT scanners enable dynamic thin-slice acquisition, but thick slices (≥5 mm) are standard in stroke imaging to reduce data and processing.
- Thin-slice CT perfusion (CTP) reconstruction may minimize partial volume effects, potentially improving quantitative accuracy and resolution.
- Assessing the impact of thin-slice reconstruction on CTP constancy is crucial before clinical adoption.
Purpose of the Study:
- To investigate the influence of thin-slice reconstruction on average CTP values compared to standard thick-slice reconstruction.
- To evaluate the effect of different slice thicknesses on absolute and relative perfusion parameters: cerebral blood volume (CBV), cerebral blood flow (CBF), mean transit time (MTT), and permeability-surface area product (PS).
Main Methods:
- Analysis of 50 patient CTP studies using 0.8, 2.4, 4.8, and 9.6 mm slice reconstructions.
- Investigation of the impact of Gaussian and bilateral filtering, arterial input function (AIF), and motion correction on perfusion values.
Main Results:
- Absolute CBF, CBV, and PS were significantly lower with 0.8 mm slices compared to 4.8 mm slices (22%, 14%, and 46% respectively).
- Using thin-slice derived AIF and motion correction reduced these differences to 3%, 4%, and 3%.
- The effect of slice thickness on relative perfusion values was minimal.
Conclusions:
- Thin-slice CTP reconstruction, with an unaltered acquisition protocol, yields relative perfusion values without clinically significant bias.
- Absolute perfusion values, especially CBF and CBV, are affected by thin-slice reconstruction due to partial volume effects in large vessels.
- Reconstruction slice thickness must be considered when utilizing absolute perfusion values for clinical decision-making in stroke imaging.

