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Removal of Exogenous Materials from the Outer Portion of Frozen Cores to Investigate the Ancient Biological Communities Harbored Inside
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Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from
Hae-Won Lee1,2, Dae-Won Kim3, Mi-Hwa Lee4
1Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
Abstract:
An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %.
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