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Related Concept Videos

Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

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The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
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Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure.  Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
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Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
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The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
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Related Experiment Video

Updated: Mar 31, 2026

Metabolic Labeling of Newly Transcribed RNA for High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay in Cell Culture
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The Low Noise Limit in Gene Expression.

Roy D Dar1, Brandon S Razooky2, Leor S Weinberger3

  • 1Gladstone Institute of Virology and Immunology, San Francisco, California, United States of America; Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America; Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America.

Plos One
|October 22, 2015
PubMed
Summary

Variability in protein translation, not constitutive noise, dictates gene expression limits. This study reveals two distinct noise patterns: a global floor from bursting and high noise in specific genes.

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Area of Science:

  • Molecular Biology
  • Systems Biology
  • Biophysics

Background:

  • Protein noise measurements are crucial for understanding biophysical parameters in gene expression.
  • Current noise analyses often conflict with directly measured parameters, indicating underlying analytical issues.

Purpose of the Study:

  • To resolve inconsistencies between protein noise measurements and directly measured biophysical parameters.
  • To investigate the role of translational bursting in setting the low noise limit of gene expression.

Main Methods:

  • Analysis of genome-wide translational efficiency variations.
  • Comparison of noise patterns in gene expression data, specifically in E. coli.

Main Results:

  • Inconsistencies in noise analysis stem from assuming invariant translation rates and overlooking translational bursting.
  • Systematic variations in translational efficiency, not constitutive extrinsic noise, control the low noise limit.
  • Identified two distinct gene expression noise patterns: a global floor from bursting and high noise in select genes.

Conclusions:

  • Translational bursting variability is a key determinant of the low noise limit in gene expression.
  • Constitutive extrinsic noise plays a minor role when translational efficiency varies systematically.
  • Gene expression exhibits distinct noise patterns influenced by bursting mechanisms.