Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Protein Networks02:26

Protein Networks

2.9K
2.9K
Protein Networks02:26

Protein Networks

4.7K
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
4.7K
Pie Chart01:04

Pie Chart

17.0K
A pie chart (or a pie graph) is a circular graphical chart or a pictorial representation of categorical data. It is divided into slices of pie each indicating numerical proportions. It is also used to show the relative sizes of data in a single chart.
In a pie chart, the central angle, the arc length of each slice, and the area are directly proportional to the quantity or percentage it represents. Some real-world examples that can be depicted using pie charts include marks obtained by students...
17.0K
Protein and Protein Structures02:15

Protein and Protein Structures

20.1K
20.1K
Protein Families02:47

Protein Families

17.5K
Protein families are groups of homologous proteins; that is, they have similarities in amino acid sequences and three-dimensional structures. Protein families usually occur because of gene duplication, where an additional copy of a gene is inserted into the genome of an organism.   Mutations that change the amino acids but still allow the protein to be properly synthesized, will lead to new protein family members.   If these new proteins contain similar amino acids in key...
17.5K
Protein Families02:47

Protein Families

4.6K
4.6K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A Single Concussion in Juvenile Mice Leads to Sex Specific Acute Cerebral Vascular Dysfunction and Blood-brain Border Dysfunction.

Research square·2026
Same author

Evidence for Aerosolized Environmental Bacterial Endotoxin as an Environmental Health Hazard.

medRxiv : the preprint server for health sciences·2025
Same author

Spatial transcriptomics reveals distinct role of monocytes/macrophages with high <i>FCGR3A</i> expression in kidney transplant rejections.

Frontiers in immunology·2025
Same author

Structural genomics of bacterial drug targets: Application of a high-throughput pipeline to solve 58 protein structures from pathogenic and related bacteria.

Microbiology resource announcements·2025
Same author

Chronic, Low-Dose Methamphetamine Reveals Sexual Dimorphism of Memory Performance, Histopathology, and Gene Expression Affected by HIV-1 Tat Protein in a Transgenic Model of NeuroHIV.

Viruses·2025
Same author

Global atlas of predicted functional domains in Legionella pneumophila Dot/Icm translocated effectors.

Molecular systems biology·2024
Same journal

3DICE: Interpretable 3D Cross-Modal Learning for Drug-Target Interaction Prediction and Large-Scale Drug Discovery.

Bioinformatics (Oxford, England)·2026
Same journal

KASSPer: Kinase Active Site Structure Prediction using Protein and Ligand Language Models and Its Application to Virtual Screening.

Bioinformatics (Oxford, England)·2026
Same journal

IDR searcher: a search engine solution for public image resources.

Bioinformatics (Oxford, England)·2026
Same journal

KCFtools: Rapid alignment-free method for introgression screening and GWAS using k-mer profiles.

Bioinformatics (Oxford, England)·2026
Same journal

Meta2DB: Curated shotgun metagenomic feature sets and metadata for health state prediction.

Bioinformatics (Oxford, England)·2026
Same journal

conMItion: an R package adjusting confounding factors for associations in multi-omics.

Bioinformatics (Oxford, England)·2026
See all related articles

Related Experiment Video

Updated: Mar 31, 2026

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
09:51

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web

Published on: July 16, 2017

16.2K

Protael: protein data visualization library for the web.

Mayya Sedova1, Lukasz Jaroszewski1, Adam Godzik1

  • 1Bioinformatics and Systems Biology Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92307, USA and Center for Structural Genomics of Infectious Diseases (CSGID), Chicago, IL 60611, USA.

Bioinformatics (Oxford, England)
|October 31, 2015
PubMed
Summary
This summary is machine-generated.

Protael is a JavaScript library for interactive biological sequence visualizations. It enables high-quality Scalable Vector Graphics (SVG) generation for web integration.

More Related Videos

Modeling an Enzyme Active Site using Molecular Visualization Freeware
14:37

Modeling an Enzyme Active Site using Molecular Visualization Freeware

Published on: December 25, 2021

11.9K
An Integrated Approach for Microprotein Identification and Sequence Analysis
09:37

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

4.1K

Related Experiment Videos

Last Updated: Mar 31, 2026

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
09:51

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web

Published on: July 16, 2017

16.2K
Modeling an Enzyme Active Site using Molecular Visualization Freeware
14:37

Modeling an Enzyme Active Site using Molecular Visualization Freeware

Published on: December 25, 2021

11.9K
An Integrated Approach for Microprotein Identification and Sequence Analysis
09:37

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

4.1K

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Web Development

Background:

  • Interactive visualization of biological data is crucial for analysis.
  • Existing tools may lack flexibility or web integration capabilities.

Purpose of the Study:

  • To introduce Protael, a novel JavaScript library.
  • To facilitate the creation of interactive biological sequence visualizations for the web.

Main Methods:

  • Developed as a JavaScript library.
  • Focuses on generating Scalable Vector Graphics (SVG).
  • Designed for easy integration into web pages.

Main Results:

  • Protael enables dynamic rendering of biological sequences.
  • Allows visualization of associated data alongside sequences.
  • Outputs high-quality, scalable vector graphics.

Conclusions:

  • Protael provides a flexible solution for web-based biological data visualization.
  • Its SVG output ensures high quality and scalability.
  • The library is freely available with source code and documentation.