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Related Experiment Video

Updated: Mar 30, 2026

Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine
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Molecular marker database for efficient use in agricultural breeding programs.

Chang-Kug Kim1, Gang-Seob Lee2, Ji-Su Mo1

  • 1Genomics Division, National Academy of Agricultural Science (NAAS), Jeonju 54874, Korea.

Bioinformation
|November 4, 2015
PubMed
Summary
This summary is machine-generated.

The National Agricultural Biotechnology Information Center developed a molecular marker database featuring 7,847 sequence-tagged site (STS) markers from 11 species. This resource aids agricultural biotechnology research by providing accessible genetic information.

Keywords:
molecular markersequence-tagged site marker

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Area of Science:

  • Agricultural Biotechnology
  • Genomics
  • Bioinformatics

Background:

  • Next-generation sequencing (NGS) technologies have accelerated the identification of molecular markers.
  • Efficient data management and accessibility are crucial for leveraging genomic information in agriculture.

Purpose of the Study:

  • To construct a centralized, web-based database for molecular markers.
  • To provide comprehensive information on sequence-tagged site (STS) markers.

Main Methods:

  • Utilized next-generation sequencing (NGS) to identify molecular markers.
  • Developed a web-based platform with search, viewer, and download functionalities.
  • Compiled detailed annotation data for each marker.

Main Results:

  • Successfully curated a database of 7,847 STS markers across 11 species.
  • Implemented a user-friendly interface with keyword search, detailed viewing, and data download options.
  • Annotation table includes ownership, basic, and STS-related characterization information.

Conclusions:

  • The NABIC molecular marker database enhances accessibility to critical genetic resources for agricultural research.
  • This resource supports advancements in crop improvement and agricultural biotechnology through efficient data sharing.