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Graph-based unsupervised feature selection and multiview clustering for microarray data.

Tripti Swarnkar1, Pabitra Mitra

  • 1Department of Computer Science and Engineering, Indian Institute of Technology, Kharagpur 721 302, India, swarnkar.tripti@gmail.com.

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|November 14, 2015
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Summary
This summary is machine-generated.

This study introduces an unsupervised feature selection method for analyzing gene expression data from microarray experiments. The technique extracts multiple clustering views to uncover complex biological insights, improving disease diagnosis and treatment.

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Area of Science:

  • Bioinformatics
  • Computational Biology
  • Genomics

Background:

  • Microarray experiments generate large volumes of gene expression data requiring sophisticated analysis.
  • Identifying informative genes is crucial for extracting biologically meaningful information and aiding disease diagnosis, prognosis, and treatment.

Purpose of the Study:

  • To present an unsupervised feature selection technique for explorative data analysis of high-dimensional gene expression data.
  • To address the challenge of extracting multiple, diverse clustering views from complex datasets.

Main Methods:

  • Developed an unsupervised feature selection technique.
  • Focused on extracting multiple clustering views that capture data diversity.
  • Evaluated the technique on benchmark datasets.

Main Results:

  • The proposed model demonstrates potential and effectiveness in analyzing gene expression data.
  • Experimental results show favorable comparisons against traditional single-view clustering models.
  • The technique outperforms other existing methods for the studied datasets.

Conclusions:

  • The unsupervised feature selection technique offers a powerful approach for analyzing high-throughput gene expression data.
  • Extracting multiple clustering views enhances the ability to uncover hidden biological information.
  • This method aids in advancing the understanding and application of microarray data in disease research.