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Mechanism-based candidate inhibitors of uridine diphosphate galactopyranose mutase (UGM)
Yasaman Mahdavi-Amiri1, Sankar Mohan1, Silvia Borrelli1
1Department of Chemistry, Simon Fraser University, Burnaby, BC, Canada V5A 1S6.
Abstract:
Uridine diphosphate-galactopyranose mutase (UGM), an enzyme found in many eukaryotic and prokaryotic human pathogens, catalyzes the interconversion of UDP-galactopyranose (UDP-Galp) and UDP-galactofuranose (UDP-Galf), the latter being used as the biosynthetic precursor of the galactofuranose polymer portion of the mycobacterium cell wall. We report here the synthesis of a sulfonium and selenonium ion with an appended polyhydroxylated side chain. These compounds were designed as transition state mimics of the UGM-catalyzed reaction, where the head groups carrying a permanent positive charge were designed to mimic both the shape and positive charge of the proposed galactopyranosyl cation-like transition state. An HPLC-based UGM inhibition assay indicated that the compounds inhibited about 25% of UGM activity at 500 µM concentration.
Insights
Researchers synthesized novel sulfonium and selenonium ions to mimic the transition state of the Uridine diphosphate-galactopyranose mutase (UGM) enzyme. These compounds showed moderate inhibition of UGM activity, offering potential for new therapeutic strategies against pathogens.
Area of Science:
- Biochemistry
- Medicinal Chemistry
- Microbiology
Background:
- Uridine diphosphate-galactopyranose mutase (UGM) is crucial for synthesizing the mycobacterial cell wall.
- UGM interconverts UDP-galactopyranose (UDP-Galp) and UDP-galactofuranose (UDP-Galf).
- UDP-Galf is essential for the galactofuranose polymer component of the mycobacterium cell wall.
Purpose of the Study:
- To design and synthesize novel transition state mimics for UGM.
- To investigate the inhibitory potential of these mimics against UGM activity.
Main Methods:
- Synthesis of sulfonium and selenonium ions with polyhydroxylated side chains.
- Design of compounds to mimic the proposed galactopyranosyl cation-like transition state.
- HPLC-based UGM inhibition assay to quantify enzyme activity.
Main Results:
- Novel sulfonium and selenonium ions were successfully synthesized.
- The synthesized compounds acted as transition state mimics for UGM.
- Compounds inhibited approximately 25% of UGM activity at 500 µM concentration.
Conclusions:
- The synthesized compounds demonstrate potential as UGM inhibitors.
- These findings contribute to the development of novel therapeutic agents targeting mycobacterial infections.
- Further optimization may lead to more potent UGM inhibitors.
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