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Related Concept Videos

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The brain processes sensory information rapidly due to parallel processing, which involves sending data across multiple neural pathways at the same time. This method allows the brain to manage various sensory qualities, such as shapes, colors, movements, and locations, all concurrently. For instance, when observing a forest landscape, the brain simultaneously processes the movement of leaves, the shapes of trees, the depth between them, and the various shades of green. This enables a quick and...
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Related Experiment Videos

Massively Multicore Parallelization of Kohn-Sham Theory.

Philip Brown1, Christopher Woods1, Simon McIntosh-Smith1

  • 1Centre for Computational Chemistry, School of Chemistry, University of Bristol, Bristol, BS8 1TS, United Kingdom, and ClearSpeed Technology plc, 3110 Great Western Court, Hunts Ground Road, Bristol, BS34 8HP, United Kingdom.

Journal of Chemical Theory and Computation
|December 2, 2015
PubMed
Summary

This study details a multicore parallelization for Kohn-Sham density functional theory (KS-DFT) using ClearSpeed Technology accelerators. The method efficiently scales to 2304 cores with minimal approximation errors.

Related Experiment Videos

Area of Science:

  • Computational Chemistry
  • Materials Science
  • High-Performance Computing

Background:

  • Kohn-Sham density functional theory (KS-DFT) is a cornerstone of modern computational materials science.
  • Scaling KS-DFT calculations to larger systems is crucial for advancing scientific discovery.
  • Accelerator technologies offer potential for significant performance gains in scientific computing.

Purpose of the Study:

  • To describe a novel multicore parallelization strategy for KS-DFT.
  • To leverage ClearSpeed Technology accelerator hardware for enhanced computational performance.
  • To achieve efficient parallelization of KS-DFT on a large-scale computing cluster.

Main Methods:

  • Implementation of a multicore parallelization scheme for KS-DFT.
  • Utilization of ClearSpeed Technology accelerator cards.
  • Reformulation of the Coulomb problem using Poisson density fitting.
  • Application of numerical quadrature for three-index integrals.

Main Results:

  • Successful parallelization of KS-DFT across 2304 cores.
  • Demonstration of efficient scaling on the parallel architecture.
  • Validation of the reformulated Coulomb problem approach with negligible errors.
  • Significant speedup achieved using the accelerator technology.

Conclusions:

  • The described parallelization method enables efficient large-scale KS-DFT computations.
  • ClearSpeed Technology accelerators provide a viable pathway for accelerating KS-DFT.
  • The approximations introduced are validated and do not compromise accuracy.
  • This work paves the way for tackling more complex materials science problems.