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Updated: Mar 27, 2026

Oncogenic Gene Fusion Detection Using Anchored Multiplex Polymerase Chain Reaction Followed by Next Generation Sequencing
Published on: July 5, 2019
Molecular mechanisms that underpin EML4-ALK driven cancers and their response to targeted drugs
Richard Bayliss1,2, Jene Choi3, Dean A Fennell4
1Department of Molecular and Cell Biology, University of Leicester, Lancaster Road, Leicester, LE2 9HN, UK. r.w.bayliss@leeds.ac.uk.
Abstract:
A fusion between the EML4 (echinoderm microtubule-associated protein-like) and ALK (anaplastic lymphoma kinase) genes was identified in non-small cell lung cancer (NSCLC) in 2007 and there has been rapid progress in applying this knowledge to the benefit of patients. However, we have a poor understanding of EML4 and ALK biology and there are many challenges to devising the optimal strategy for treating EML4-ALK NSCLC patients. In this review, we describe the biology of EML4 and ALK, explain the main features of EML4-ALK fusion proteins and outline the therapies that target EML4-ALK. In particular, we highlight the recent advances in our understanding of the structures of EML proteins, describe the molecular mechanisms of resistance to ALK inhibitors and assess current thinking about combinations of ALK drugs with inhibitors that target other kinases or Hsp90.
Insights
The echinoderm microtubule-associated protein-like (EML4) and anaplastic lymphoma kinase (ALK) gene fusion drives non-small cell lung cancer. This review details EML4-ALK biology, targeted therapies, and resistance mechanisms for improved patient treatment strategies.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The echinoderm microtubule-associated protein-like (EML4)-anaplastic lymphoma kinase (ALK) gene fusion is a key driver in a subset of non-small cell lung cancer (NSCLC).
- Despite significant therapeutic advances since its discovery in 2007, a comprehensive understanding of EML4 and ALK biology remains limited.
- Optimal treatment strategies for patients with EML4-ALK-positive NSCLC face ongoing challenges due to complex biological factors.
Purpose of the Study:
- To review the fundamental biology of EML4 and ALK genes and their fusion proteins.
- To outline current and emerging therapies targeting EML4-ALK fusions in NSCLC.
- To discuss recent advancements in understanding EML protein structures, resistance mechanisms to ALK inhibitors, and combination therapy approaches.
Main Methods:
- Literature review focusing on EML4-ALK fusion in NSCLC.
- Analysis of published data on EML4 and ALK gene and protein biology.
- Synthesis of information on ALK inhibitor mechanisms, resistance pathways, and novel therapeutic combinations.
Main Results:
- Detailed description of EML4 and ALK gene fusion characteristics and their role in oncogenesis.
- Overview of established and investigational therapies targeting EML4-ALK.
- Highlighting recent insights into EML protein structural biology and molecular mechanisms of resistance to ALK inhibitors.
Conclusions:
- Understanding EML4-ALK biology is crucial for refining treatment strategies in NSCLC.
- Targeted therapies have shown efficacy, but resistance remains a significant clinical challenge.
- Investigating novel drug combinations, including those targeting other kinases or Hsp90, holds promise for overcoming resistance and improving patient outcomes.
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